Pairwise Alignments
Query, 379 a.a., FOG: WD40-like repeat from Sphingomonas koreensis DSMZ 15582
Subject, 395 a.a., outer membrane protein assembly complex subunit YfgL (RefSeq) from Shewanella loihica PV-4
Score = 79.7 bits (195), Expect = 1e-19
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 136 PVVHEGRVYVGSLSGALFAVDAATGRQVWTL--------GTLDAIRGNPVVHA-----GR 182
P V G+++V G + A D ATG QVW+L G L +G + +
Sbjct: 64 PAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEGALSKNKGARLSSGITAARNK 123
Query: 183 VYFGSWDDHLYAVDLKTGKPVWRVDTGGIVQSTPSIDQGRVVIGNRAAKLIAYDAETGKQ 242
V+FG L AVD +TG+ VW V GG + S P++ + VV+ L AY+ + GKQ
Sbjct: 124 VFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDDGKQ 183
Query: 243 VWSHDYADGS----WVESSAIAAGGMLYVGSSDSLKVSAVAADTGRELWQ 288
+W ++ + S+A AGG +VG++D KV+ V G+ W+
Sbjct: 184 LWVYESKLPTLTLRGTGSAAYEAGG-FFVGTADG-KVAVVVKSNGQAAWE 231
Score = 62.8 bits (151), Expect = 2e-14
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 33 GGQIWGSLTHDAGTLYFGSDDHRVYALDTASRKLKWTFRTGGKVRAQPAVAGDRVFVASD 92
G ++ +T ++FG + + A+D + ++ W GG++ + P V D V V +
Sbjct: 110 GARLSSGITAARNKVFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTS 169
Query: 93 DGFLYALDRATGRQLWRFDLKASDLHRRPPSADNSYFDFLQSSPVVHEGRVYVGSLSGAL 152
G L A + G+QLW ++ K L R S G +VG+ G +
Sbjct: 170 TGALEAYNVDDGKQLWVYESKLPTLTLRG-----------TGSAAYEAGGFFVGTADGKV 218
Query: 153 FAVDAATGRQVWTLGTLDAIRGN-----------PVVHAGRVYFGSWDDHLYAVDLKTGK 201
V + G+ W GN P++ +Y S++ +L +++L+TG+
Sbjct: 219 AVVVKSNGQAAWEQPIYTPKGGNEFTRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGR 278
Query: 202 PVW 204
VW
Sbjct: 279 VVW 281
Score = 61.2 bits (147), Expect = 5e-14
Identities = 84/372 (22%), Positives = 138/372 (37%), Gaps = 88/372 (23%)
Query: 65 KLKWTFRTGGKV-----RAQPAVAGDRVFVASDDGFLYALDRATGRQLWRFDL------- 112
++ W+ G V + +PAV ++FV G + A D ATG Q+W ++
Sbjct: 44 EVSWSASVGSGVGDYYSKIRPAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEG 103
Query: 113 -----KASDLHRRPPSADNSYF-------------------------DFLQSSPVVHEGR 142
K + L +A N F L S+P V E
Sbjct: 104 ALSKNKGARLSSGITAARNKVFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDV 163
Query: 143 VYVGSLSGALFAVDAATGRQVWT----LGTLDAI-RGNPVVHAGRVYFGSWDDHLYAVDL 197
V V + +GAL A + G+Q+W L TL G+ AG + G+ D + V
Sbjct: 164 VVVHTSTGALEAYNVDDGKQLWVYESKLPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVK 223
Query: 198 KTG-----KPVWRVDTGGIVQSTPSIDQGRVVIGNRA------AKLIAYDAETGKQVWSH 246
G +P++ G +D +++G L++ + TG+ VWS
Sbjct: 224 SNGQAAWEQPIYTPKGGNEFTRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGRVVWSR 283
Query: 247 DYADGSWVESSAIAAGGMLYVGSSDSLKVSAVAADTGRELW-QFKTGGWTWATPVLANGT 305
Y+ + +A+ G+ D +V AV G E W + +PV+
Sbjct: 284 KYS-----SFNELASAGLNLYLVDDHGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDY 338
Query: 306 LYIGALSGYPYYFEGVTLRHGFHAIDAATGREKWSFALPRVAGYV---TGGVAAAPAVAG 362
L +G GY H ID A+G ++ G V + G+ + P V
Sbjct: 339 LVVGDFEGY------------LHFIDRASG---------KLVGRVEVDSSGLFSQPLVID 377
Query: 363 GIVYVGAIDGRI 374
+YV + G++
Sbjct: 378 DKIYVQSRGGKV 389
Score = 56.2 bits (134), Expect = 2e-12
Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 78/278 (28%)
Query: 14 GLSGVAHASPGSKLWEFRAGG-------------------------------QIW----- 37
GL G A G +W AGG Q+W
Sbjct: 131 GLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDDGKQLWVYESK 190
Query: 38 ---------GSLTHDAGTLYFGSDDHRVYALDTASRKLKW-----------TFRTGGKVR 77
GS ++AG + G+ D +V + ++ + W F V
Sbjct: 191 LPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGGNEFTRMADVD 250
Query: 78 AQPAVAGDRVFVASDDGFLYALDRATGRQLWRFDLKASDLHRRPPSADNSYFDFLQSSPV 137
+P + G+ ++ S +G L +++ TGR +W S S F+ L S+ +
Sbjct: 251 MKPLIVGENIYAVSYNGNLVSMELRTGRVVW--------------SRKYSSFNELASAGL 296
Query: 138 VHEGRVYVGSLSGALFAVDAATGRQVWTLGTL-DAIRGNPVVHAGRVYFGSWDDHLYAVD 196
+Y+ G ++AVD G + W+ L + +PVV + G ++ +L+ +D
Sbjct: 297 ----NLYLVDDHGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDYLVVGDFEGYLHFID 352
Query: 197 LKTGKPVWR--VDTGGIVQSTPSIDQGRVVIGNRAAKL 232
+GK V R VD+ G+ S P + ++ + +R K+
Sbjct: 353 RASGKLVGRVEVDSSGLF-SQPLVIDDKIYVQSRGGKV 389