Pairwise Alignments

Query, 443 a.a., Na+/H+-dicarboxylate symporters from Sphingomonas koreensis DSMZ 15582

Subject, 437 a.a., sodium:dicarboxylate symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (392), Expect = 2e-42
 Identities = 115/412 (27%), Positives = 203/412 (49%), Gaps = 24/412 (5%)

Query: 26  RILIALVAALVIGVGAAATAPQGALVAADWIAP-----VGTIWLHALQMTIIPLVVSLLI 80
           +ILI +   ++ G+      P    +  D+I       +GTI++ +L+M ++PLV   L+
Sbjct: 14  KILIGMATGIIFGLILRNLFPDSIFIK-DYITDGFLHVIGTIFISSLKMLVVPLVFISLV 72

Query: 81  TGISATAEKARAGRLAGR--AFITFIVLLWFSSAIGGALTVFYLDLFPLASSSAQALQGA 138
            G  + +E ++ GRL G+  AF  F  +L    A+  A+ V   D    A+ + + L   
Sbjct: 73  CGTCSLSEPSKLGRLGGKTLAFYLFTTVLALVLAVFAAVIVHPGD----ATLANEKLNYV 128

Query: 139 LAEKTPEIGTVPPFVDFIVAMVPSNPVTSAANDAFLPLILFTTVFAFALTRLPREQRETL 198
             E        P F   I+ M+P+NPV + +    L +I+F  +F FA+  L  E+   +
Sbjct: 129 AKE-------APSFAQVIIDMMPTNPVQAMSEGNMLQIIIFAVIFGFAIAHL-GERGNRI 180

Query: 199 TRFFEALGNTMLVVINWVLWLGPIGVAALAYMVGARAGTAAFGALLHYVAILCGVGLVMW 258
            + F+ L N ++ V+  V+ L P GV AL   +    G   FG+++ Y  ++  + L+  
Sbjct: 181 AQLFDDLNNVIMRVVTLVMQLAPYGVFALMAKLALTLGLETFGSVVKYFFLVLTLLLIHN 240

Query: 259 LLAAPFGIIA-GRVSPMRYIRAVAPSQAVAFSTQSSLASLPAMLKATE-TLGVPAAHSGV 316
            +     + A   ++P+ +IR +   Q  AFST SS A+LP  ++A+E  LGV    +  
Sbjct: 241 FVTYSILLKAFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASF 300

Query: 317 ALPIAVAIFRWTGPAMNFAVAIYVAHLLGIELGPSQLAAGWVVAAITTMGAVGLPGTISF 376
            LP+   I       M     +++A + GIEL  +  AA  V A + ++G  G+PG    
Sbjct: 301 TLPLGATINMDGTAIMQGVATVFIAQVFGIELSLTDYAAVIVTATLASIGTAGVPGV--G 358

Query: 377 VSSIAPIATAMGVPLPMLGLLVAVETIPDLFRTLGNVAMDVSATRVVSLRTG 428
           +  +A +   +G+P+  + L++ V+ + D+ RT  NV  D  AT +++   G
Sbjct: 359 LIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVATVIIAKSEG 410