Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 168 a.a., RNA polymerase from Azospirillum brasilense Sp245

 Score =  103 bits (258), Expect = 1e-27
 Identities = 61/153 (39%), Positives = 86/153 (56%)

Query: 5   DELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRNLW 64
           D+L   L  LRR+A ALAR+  DA+DL+Q ++ RA+     + P   L SW++ ++ N+ 
Sbjct: 3   DQLSNQLRSLRRYALALARNRDDAEDLVQETLVRAISGSRTFRPNGDLRSWLFGILHNVH 62

Query: 65  IDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVIEG 124
           ++ +R E  R     A +          Q   VEL     A   LP EQR  + LV +EG
Sbjct: 63  VNGVRREQVRARGASAIEAMTYGQMPPNQPDHVELMRTIEAFSTLPDEQRRVLTLVAVEG 122

Query: 125 FAYKEAAAILEIPMGTLTSRLVRGREALMARLG 157
            +Y+EAA  L+IP+GTL SRL RGREAL   +G
Sbjct: 123 MSYQEAARQLDIPLGTLMSRLARGREALRVEMG 155