Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 169 a.a., RNA polymerase subunit sigma-24 from Azospirillum brasilense Sp245

 Score =  112 bits (279), Expect = 4e-30
 Identities = 58/154 (37%), Positives = 94/154 (61%)

Query: 3   FEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRN 62
           F  EL +H+  LRR+A AL R+ +DA+DL+Q ++ RA+ + D +  GT L +W++ ++ N
Sbjct: 4   FGVELEVHIASLRRYARALLRNRSDAEDLVQEALTRAVARADTFKAGTNLRAWLFTILHN 63

Query: 63  LWIDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVI 122
           + ++ +R++  R +          +     QE  VEL  + RA+  LP EQR+ + LV +
Sbjct: 64  VHVNQVRSKASRPDEVDVDSVESKLVTPARQEERVELREMMRALDDLPEEQRKVLLLVAL 123

Query: 123 EGFAYKEAAAILEIPMGTLTSRLVRGREALMARL 156
           EG  Y+E A  L +P+GT+ SRL R REA+ A+L
Sbjct: 124 EGLKYEEVAETLGVPIGTVMSRLSRAREAVRAKL 157