Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score =  124 bits (311), Expect = 8e-34
 Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 2/157 (1%)

Query: 5   DELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRNLW 64
           + L+  LP LRRFA +L  S   ADDL+Q++ ERAL   +++ PGTR D+W++R++RNLW
Sbjct: 10  ERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLW 69

Query: 65  IDTIRAETRRCETFVAPQTGEIVGADGGQ--EMTVELGNVARAMRALPPEQREAVALVVI 122
           ID +R +          +  +I G+ G +  E  + L  VA A+  LP EQRE V LV +
Sbjct: 70  IDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCV 129

Query: 123 EGFAYKEAAAILEIPMGTLTSRLVRGREALMARLGET 159
           E  +Y+EAA ++ IP+GT+ SRL+R R +L    G T
Sbjct: 130 EELSYREAADVMGIPIGTVMSRLMRARRSLAEAAGIT 166