Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

 Score =  108 bits (271), Expect = 4e-29
 Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)

Query: 2   RFEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMR 61
           +F+ E++  LPRLRRFA +L RS ADADDLLQ +   AL K  Q+ P   LD WM+R++R
Sbjct: 17  QFKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMFRVLR 76

Query: 62  NLWIDTIRAETRRCETFVAP-------QTGEIVGADGGQEMTVELGNVARAMRALPPEQR 114
           NLW+  IR    R    V P           + GAD   E T+    V   +  + P   
Sbjct: 77  NLWVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVA-ETTLTARQVQSRIADMDPALA 135

Query: 115 EAVALVVIEGFAYKEAAAILEIPMGTLTSRLVRGREALMARL 156
           + + LV  EG++Y+E + +L++P+GT+ SR+ R R+ L++ L
Sbjct: 136 QPLLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLLISSL 177