Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 182 a.a., RNA polymerase subunit sigma-24 from Cupriavidus basilensis FW507-4G11

 Score =  108 bits (269), Expect = 6e-29
 Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 1/156 (0%)

Query: 5   DELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRNLW 64
           D++ + LP+LRR+A AL   +A ADDL+Q + ERAL +  +   G +  +WM  ++R+L+
Sbjct: 5   DDIAVWLPQLRRYARALTGDAAWADDLVQDTAERALAQGKRLPAGIQARAWMLTVLRHLY 64

Query: 65  IDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVIEG 124
           ID +R   R      A    +   A   +   + L +V RA+  LP EQRE + L+V+EG
Sbjct: 65  IDQLRRR-REVALDAADPLWQRQAAPASEVDGLVLRDVQRALYRLPLEQREVLLLIVLEG 123

Query: 125 FAYKEAAAILEIPMGTLTSRLVRGREALMARLGETA 160
             Y+EAAA+L +P+GT+ SRL R RE L A L + A
Sbjct: 124 LRYQEAAAVLHVPLGTVMSRLSRAREHLRALLADGA 159