Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 176 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

 Score =  101 bits (252), Expect = 6e-27
 Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 17/166 (10%)

Query: 1   LRFEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLM 60
           + FE E++  LP+LRR+A AL    A ADDL+Q + ERAL +   + P + L +W+  ++
Sbjct: 1   MNFEAEVISWLPQLRRYARALTGDHAWADDLVQDTAERALARWAAFRPDSNLRAWLLTIL 60

Query: 61  RNLWIDTIRA--------ETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPE 112
           R+L+ID +R         E+       APQ GE+ G        + L ++ RA+  LP E
Sbjct: 61  RHLYIDQLRGRREIAVDDESAPWRNLEAPQ-GEVDG--------LVLRDLQRALYCLPVE 111

Query: 113 QREAVALVVIEGFAYKEAAAILEIPMGTLTSRLVRGREALMARLGE 158
           QRE + LV +E  +Y+EA+  L +P+GT+ SRL R RE + A L E
Sbjct: 112 QREVLLLVCVEELSYQEASRALGVPIGTVMSRLSRAREHMRALLTE 157