Pairwise Alignments

Query, 409 a.a., ABC-type Na+ efflux pump, permease component from Sphingomonas koreensis DSMZ 15582

Subject, 476 a.a., sodium export permease protein from Caulobacter crescentus NA1000

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 106/389 (27%), Positives = 168/389 (43%), Gaps = 42/389 (10%)

Query: 49  AASISKSG---DDKARIVLLAGGDQA-RSAIA------ADRQLRAMFRSLEQPP---RLI 95
           AA++S +G    +  R   L GGD A R A+A      A R       ++  PP    L 
Sbjct: 83  AAALSAAGPEAQEAVRKAQLEGGDAAGREALARFNPTAAARFKAPKVDAVVLPPPAQALA 142

Query: 96  VETPGPNPEAQGRAMFERKESDTYAVMYGPLDKPQILHSVNGGRSAAY--LAALADQVLR 153
            +TP        R + E++      V     D    L S N         L     +++R
Sbjct: 143 AKTPAEAGAIARREVAEKRLDSVLIVSGRDADVTLDLWSRNLAAPVLEGDLRQTVSEIMR 202

Query: 154 AQ---RAGTAAP-LSEATKIIVT----RPGASAGGQGQA-----AFFATTALFMI-SLLL 199
            +   RAG +A  LSEA  +  T     P A++G +         F    A F++ S+++
Sbjct: 203 ERALARAGVSAQTLSEADALKPTFNSLSPKAASGAKVALRDRLPTFVGLAAGFLLWSMVM 262

Query: 200 AGQ--VVGTMAEERSNKVIEVLAAAVPLESVFFGKLVGMFGVALLFLGFWGTVVVNVGSL 257
            G   ++ ++ EE+S+K++EVL ++  +  +  GK++G+ G+ L  +G W       G +
Sbjct: 263 TGASILLNSVIEEKSSKILEVLLSSASVPEIMGGKILGVAGLTLTVMGVWAMA----GWV 318

Query: 258 LPVKLATAFIDVGPAVGLPMFGLLFFA-YFVTSYMLLGAVFLGLGAQASTQRELQMMSLP 316
             +  A        AV L    LL+F  Y V  Y++  A+F G+GA   TQR+ Q +  P
Sbjct: 319 ALINFAPGLAGDLVAVLLGKGLLLYFGVYLVGGYLMYAALFAGVGAFCETQRDAQTLLGP 378

Query: 317 ITIFQVAMWGLASATALSPDSGLATAAAAFPFSSPFAMVARAANAPDLWPHALALGWQIL 376
           I +         S    SPDS + +  +  P  +PF M  R A  P   P    +G  +L
Sbjct: 379 IILVMSIPIIFMSQAIRSPDSPILSTLSWIPPFTPFLMPVRIAGDP---PLIQIIGTTVL 435

Query: 377 WVAITVTIAA---RLFRRGVLQSGSPGLR 402
            +  TV + A   R F  G L +G   L+
Sbjct: 436 MIVTTVALVAFSTRAFHVGALATGKIDLK 464