Pairwise Alignments

Query, 567 a.a., diguanylate cyclase (GGDEF) domain from Sphingomonas koreensis DSMZ 15582

Subject, 748 a.a., PAS-family GGDEF/EAL family protein from Caulobacter crescentus NA1000

 Score =  328 bits (840), Expect = 6e-94
 Identities = 182/424 (42%), Positives = 253/424 (59%), Gaps = 12/424 (2%)

Query: 123 VQRLALFDPVTALPNRIHFRRSCERALTELPNDAMA-ALFFIDLDRFKAVNDTLGHAMGD 181
           + RLA +DP+T LPNR+ F++S   AL        A A+ F+DLDRFK VNDTLGH +GD
Sbjct: 275 IARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGD 334

Query: 182 QLLGMVANRLRAVADRFTAEGDLRQPLIGRLSGDEFTIFFPVLTHVRDADRVGRGILFAL 241
            LL + A RLR        EGD     + RL GDEF I    L     A R+   I+ A+
Sbjct: 335 ALLKIAAERLRGCV----REGDT----VARLGGDEFAIVQTGLDDSNGATRLAARIVEAM 386

Query: 242 SEPFDLADQEVSIGASVGIAMRPEHGTTLTDLMRAADAAMYHAKGNGRGRAEHFSDGLAA 301
           + PFDL    V IGASVG+++ P  G    +L++ AD A+Y AK +GRG    F   +  
Sbjct: 387 AAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAMDE 446

Query: 302 EIAERAQLESDLRGAVERDQFALVYQPQISAADGRIVAAEALLRWQHPERGLCLPGTFIA 361
           ++  R  LE DLR A++  +F L YQP     D R+   EALLRW+HPERG+  P  FI 
Sbjct: 447 QLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIP 506

Query: 362 RAEETGLIVEIGEWVVENVANTIARWGKMGVEQRMAVNISPRQLDHAAFFRRLRDAMQAA 421
            AEE GLIV++GEWV+       A W +     R+AVN+SP Q       R +  A+ A+
Sbjct: 507 LAEEIGLIVQLGEWVLRRACAEAANWPE---HVRLAVNLSPAQFRDRGLVRTVVSALAAS 563

Query: 422 GAPARLLELEITETLAMHCSREVIDAIAALRADGASIAIDDFGTGYSNLARLRDLPLDRV 481
           G PA+ LELEITE++ +  S+  +  +  L+A G  I++DDFGTGYS+L+ LR  P D++
Sbjct: 564 GLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKI 623

Query: 482 KLDRSLVEHVATNAEARTIAQAVIGLIHGIGCEVVAEGIETQAQLEVLRVIGCDVLQGFV 541
           K+D++ V  +  +++A  I +AV+ L   +G    AEG+ETQAQL+ LR  GC  +QG+ 
Sbjct: 624 KIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYF 683

Query: 542 IAQP 545
           I++P
Sbjct: 684 ISRP 687