Pairwise Alignments

Query, 567 a.a., diguanylate cyclase (GGDEF) domain from Sphingomonas koreensis DSMZ 15582

Subject, 807 a.a., PAS family GGDEF/EAL protein from Caulobacter crescentus NA1000

 Score =  302 bits (773), Expect = 4e-86
 Identities = 183/459 (39%), Positives = 249/459 (54%), Gaps = 15/459 (3%)

Query: 109 MGGLFRQLHSNLESVQRLALFDPVTALPNRIHFRRSCERALTELPNDAMA--ALFFIDLD 166
           +G    Q   + E +  LA +D +T LPNR+   ++  +A  +   D  +  A+  +DLD
Sbjct: 343 VGADITQAREDQERISHLAHYDVLTQLPNRLSLLQNLGKAWMDHGRDKTSGCAVLCLDLD 402

Query: 167 RFKAVNDTLGHAMGDQLLGMVANRLRAVADRFTAEGDLRQPLIGRLSGDEFTIFFPVLTH 226
            FK VND+LGH +GD LL  VA+RLR+              ++ RL GDEF +       
Sbjct: 403 HFKGVNDSLGHPVGDALLMQVASRLRSCVGE--------TGMVARLGGDEFAVVCAPSPG 454

Query: 227 VRDADRVGRGILFALSEPFDLADQEVSIGASVGIAMRPEHGTTLTDLMRAADAAMYHAKG 286
                 + + I+  LS P+D+    V IGASVGIA+ P        L++ AD A+Y AKG
Sbjct: 455 HEALSALSQSIVETLSAPYDILGHNVLIGASVGIAVAPFDADDPDGLLKNADLALYRAKG 514

Query: 287 NGRGRAEHFSDGLAAEIAERAQLESDLRGAVERDQFALVYQPQISAADGRIVAAEALLRW 346
           +GRG    F   +     ER  LE DLR A+ RD+  L +QP I   D      EALLRW
Sbjct: 515 DGRGAYRFFETAMDVWAQERRALEMDLREALARDELKLFFQPLIGRRDNETTGFEALLRW 574

Query: 347 QHPERGLCLPGTFIARAEETGLIVEIGEWVVENVANTIARWGKMGVEQRMAVNISPRQLD 406
           QHP RGL  P  FI  AE+ GLI  IGEWV+     T A W        +AVN+SP Q  
Sbjct: 575 QHPTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATWPS---HLTVAVNLSPNQFA 631

Query: 407 HAAFFRRLRDAMQAAG-APARLLELEITETLAMHCSREVIDAIAALRADGASIAIDDFGT 465
                 ++R A++A+G APAR LELEITE L +H S + ++ +AAL+A G  IA+DDFGT
Sbjct: 632 SGDLVDQVRAALKASGLAPAR-LELEITEGLLLHDSAKTLEQLAALKALGVKIAMDDFGT 690

Query: 466 GYSNLARLRDLPLDRVKLDRSLVEHVATNAEARTIAQAVIGLIHGIGCEVVAEGIETQAQ 525
           GYS+LA L   P D++K+DRS V  +  N     I + +  L   +  EV AEG+ETQAQ
Sbjct: 691 GYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLGQTLNLEVTAEGVETQAQ 750

Query: 526 LEVLRVIGCDVLQGFVIAQPMAERDFIAWAQRAPQLKAR 564
             +L  + CD  QGF+  +PM   D  ++   A   + R
Sbjct: 751 ARLLAEMRCDQFQGFLFGRPMPVGDIPSFLMAATARRMR 789