Pairwise Alignments

Query, 228 a.a., chemotaxis protein CheY from Herbaspirillum seropedicae SmR1

Subject, 223 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  192 bits (487), Expect = 6e-54
 Identities = 102/218 (46%), Positives = 141/218 (64%)

Query: 1   MHILLVEDDIDMSRALLRALERRGFQVTHCADGISALSHIKDGIGDLVVLDLNIPGLDGL 60
           M ILLVED   ++ ++ +AL   G+ V    DGI+A   +      L +LD+ +P LDG 
Sbjct: 1   MRILLVEDHPQLAESVAQALRAAGWTVDLLQDGIAADLALASEDYALAILDVGLPRLDGF 60

Query: 61  HLLQRIRSQDIGTPVIVLTARGAVGDRVVGLNAGADDYLAKPFDLDELDARIRALLRRRT 120
            +L R+R +    PV++LTARG V DRV GLN GADDYLAKPF+L EL+AR++ALLRR  
Sbjct: 61  QVLARLRERGKTLPVLMLTARGEVSDRVHGLNLGADDYLAKPFELSELEARVKALLRRSV 120

Query: 121 NADDGVQRCGRLRFDRGSGAFYCGDDPLELTPREHTLLKALIAKPGHAVTKEKLFRLVFP 180
              +  QRCG L +D  +  F   ++PL LT RE  +L+ALIA+PG  ++K++L   VF 
Sbjct: 121 GGGERQQRCGALVYDLDARRFSLAEEPLTLTSREQGVLEALIARPGRVMSKDQLAAQVFG 180

Query: 181 MEESTQLEAIEVVVHRVRKKLMETGAEIMTLRGLGYLL 218
           ++E    EAIE+ +HR+RKKL      I+T RGLGY+L
Sbjct: 181 LDEDASAEAIEIYIHRLRKKLEGQPVRIVTFRGLGYML 218