Pairwise Alignments

Query, 432 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 415 a.a., putative ABC transporter extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 54/269 (20%), Positives = 111/269 (41%), Gaps = 30/269 (11%)

Query: 31  AQDTLVLN-ALVWAPDWAEEMQRVCDGFMHEHPGVRINLQFMIGNSVE--ENLKPRATTD 87
           A+DT+ +  A  ++  +    + +   F   HP + +  +    +  +    +   A + 
Sbjct: 19  AEDTVTIEFAYPYSHLFDVTYEAMMPAFKEAHPNIDVKFRATYESYEDGTNTILREAVSG 78

Query: 88  SLPDIVSVNASPYTASLADQGLLADLGQ---------TRSWHGLLDILQREWTAPGGCRF 138
           +LPD V++        L D+G+   L           T  +H  +  L    +  G   +
Sbjct: 79  NLPD-VTMQGLNRQQILVDKGIAKSLEPFIAKEADFTTEGYHDAMLSL----STFGDNVY 133

Query: 139 GLPSGVATTLIYYHPDLFERAGIQALPGDFEQFLAAGAALRRAGITPLALSGGFPNMLGN 198
           GLP  V+  + YY+ D+ + AG++ LP  +E  +     ++  G+      G   N+ GN
Sbjct: 134 GLPFSVSLPVGYYNMDILKEAGVETLPQTWEDVIGMCETMKANGVKNPVFWGW--NITGN 191

Query: 199 GPFSYGFANLVASSTPDWRQHIANGTLALDNAQGWAVFSRLRTLMTRHLVQADCLRAGYD 258
               +    L+ S     +  + NG +A+D+ +  A   +++ + T+     +     + 
Sbjct: 192 ----WFMQALMWSQD---KAIVDNGHVAMDSPEALAALEQMQEIFTK----CEMKNLEWK 240

Query: 259 ATLRQFAEGRAAMTFQGSWAAGVLMQGRG 287
           A L  F+ G   M F  + A G + + +G
Sbjct: 241 AALSSFSAGEIGMMFWSTSALGAVERSQG 269