Pairwise Alignments

Query, 432 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 414 a.a., putative sugar-binding periplasmic protein from Phaeobacter inhibens DSM 17395

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 58/231 (25%), Positives = 90/231 (38%), Gaps = 27/231 (11%)

Query: 73  GNSVEENLKPRATTDSLPDIVSVNASPYTASLADQGLLADL---GQTRSWHGLLDILQRE 129
           G   +     R      P +   N S     + D GLL  L    +  +W  L   +   
Sbjct: 63  GGGAKTTFVNRLMGGDAPQVGQFNTSREFEEIVDAGLLHSLDAEAEAGNWSALFPGIIDN 122

Query: 130 WTAPGGCRFGLPSGV-ATTLIYYHPDLFERAGIQALPGDFEQFLAAGAALRRAGITPLAL 188
                G  + +P  +  +  ++++  +   AG+  +P D++ F  A   L+ AGI PLA+
Sbjct: 123 VVKRDGSYYAVPVNIHGSNWLWHNNQVMADAGLD-VPTDWDSFFEAAETLKEAGIIPLAV 181

Query: 189 SG-------GFPNMLGNGPFSYGFANLVASSTPDWRQHIANGTLAL---DNAQGWAVFSR 238
            G        F ++L     S G  +L        R      T AL   +  + + V+SR
Sbjct: 182 GGEAWQERLTFNSVL----LSVGGQDLYL------RLFEEKDTTALTSDEMKEVFDVYSR 231

Query: 239 LRTLMTRHLVQADCLRAGYDATLRQFAEGRAAMTFQGSWAAGVLMQGRGQP 289
           LRTL+ R        R+  DAT      G+AAM   G WA G  +     P
Sbjct: 232 LRTLV-RETDPGSPGRSWNDAT-NMVITGQAAMQIMGDWAKGEFLSAGMTP 280