Pairwise Alignments

Query, 432 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 442 a.a., Solute-binding protein of ABC transporter system for sugars from Bifidobacterium breve UCC2003

 Score = 60.8 bits (146), Expect = 8e-14
 Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 12/203 (5%)

Query: 135 GCRFGLPSGVATTLIYYHPDLFERAGIQALPGDFEQFLAAGAALRRAGITPLALSGGFPN 194
           G  + LP+  + T IY++  L E+ GI A P   E+F A     + AGI P+        
Sbjct: 154 GDLYALPNSYSVTGIYFNTKLAEQLGIDAAPTSVEEFEADMQTAKDAGILPMM------T 207

Query: 195 MLGNGPFSYGFANLVA--SSTPDWRQHIANGTLALDNAQGWAVFSRLRTLMTRHLVQADC 252
              +G  S+ F  L+A  SS  D +  I   +   DN       S L+    +  +    
Sbjct: 208 YAKDGGTSFVFQALMANNSSAEDVQNWILQKSGTFDNQAAQDAASTLQDWNNKGYMPEGV 267

Query: 253 LRAGYDATLRQFAEGRAAMTFQGSWAAGVLMQGRGQPVGVFV-PPWNDKDQPRQAVIGSE 311
                   L +F  G       G+W    + +  G  V  F  P    +D+P    + + 
Sbjct: 268 NAVDASTALSRFCNGEGLFFPSGNWNLDTVAKALGDDVQFFAFPGATSEDEPN---VAAN 324

Query: 312 TGFAIAQRISARHRQAAARFLDY 334
            G      ++A++R AAA FLDY
Sbjct: 325 AGAFYGIPVNAKNRDAAAAFLDY 347