Pairwise Alignments

Query, 432 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 458 a.a., sugar-binding protein ABC transporter from Bifidobacterium breve UCC2003

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 73/356 (20%), Positives = 140/356 (39%), Gaps = 44/356 (12%)

Query: 4   SAAATASLLLGCERAGKEESST------VELA-PAQDTLVLNALVWAPDWAEEMQRVCDG 56
           +AAA A  L  C   G +  ++      V+ A  + + + L    WA D  ++     D 
Sbjct: 13  AAAALAFPLAACGSGGGDTGASGITADDVQAALDSDEDITLTVWTWAYDIRKKST---DA 69

Query: 57  FMHEHPGVRINLQFMIGNSVEENLKPRATTDS---LPDIVSVN--------ASPYTASLA 105
           FM ++P ++I+L    G S +   K +    +   +PDIV  +        A+   A+++
Sbjct: 70  FMKKYPHIKIDL-VSTGTSSDHYTKFQNVVKAGSGIPDIVQTDYDSMPQYAATGSLANIS 128

Query: 106 DQGLLADLGQTRSWHGLLDILQREWTAP--GGCRFGLPSGVATTLIYYHPDLFERAGIQA 163
           ++ +  + G   +           W A   G   +G+PS  A   +Y   D+ E  GI  
Sbjct: 129 EESIEKEFGSLYA--------DAAWNAVHMGDGLYGIPSDQAPVAMYVRADILEEYGID- 179

Query: 164 LPGDFEQFLAAGAALRRAGITPLALSGGFPNMLGNGPFSYGFANLVASSTPDWRQHIANG 223
           +P  +++F  AG  L  A   P    G F     +    +  A  V + + D  ++++  
Sbjct: 180 VPTTWDEFEEAGKKLHEAD--PTKYMGVFDTSNAHFMDYFFRAAGVKTYSVDGTENVS-- 235

Query: 224 TLALDNAQGWAVFSRLRTLMTRHLVQADCLRAGYDATLRQFAEGRAAMTFQGSWAAGVLM 283
              + N +   V  R++ ++   +++A     G D   R F +GR A    G W   ++ 
Sbjct: 236 -FDMQNDETKEVMERIQRMIDEGVIEATA--TGTDQFTRDFLDGRYATWIDGCWRGALIA 292

Query: 284 QG----RGQPVGVFVPPWNDKDQPRQAVIGSETGFAIAQRISARHRQAAARFLDYL 335
                  G+      P + D     +      +  A+        R AA  +++++
Sbjct: 293 SNMPSLEGKMTVELPPAYGDSSADLKTATIGGSMLAMTSACPKEKRAAAIAYMNWV 348