Pairwise Alignments

Query, 671 a.a., 3-methylcrotonyl-CoA carboxylase subunit alpha from Herbaspirillum seropedicae SmR1

Subject, 694 a.a., acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  636 bits (1641), Expect = 0.0
 Identities = 351/689 (50%), Positives = 449/689 (65%), Gaps = 39/689 (5%)

Query: 1   MFTKILIANRGEIACRVAATARRLGIATVAVYSDADARAKHVAACDESVRLGPAPARESY 60
           MFTK+LIANRGEIACR+  TA+ +G+ TVA+YSDAD  A+HVA  DES  LG +   +SY
Sbjct: 11  MFTKLLIANRGEIACRIIKTAQAMGVRTVALYSDADKNARHVAMADESFYLGGSAPADSY 70

Query: 61  LCAEKIIAAALATGAQAIHPGYGFLSENAGFAQACAQAGLVFIGPPASAIEAMGSKAAAK 120
           L  + IIA A    AQAIHPGYGFLSENA FA+ C  AG+VF+GP + AI+AMGSK+AAK
Sbjct: 71  LKGDLIIAIAKKAQAQAIHPGYGFLSENADFARKCEAAGIVFVGPGSDAIDAMGSKSAAK 130

Query: 121 ALMEQAAVPLVPGYHGEEQESGLLHSQADRIGYPVLLKASAGGGGKGMRVVERSEDFDAA 180
           A+M  A VPLVPGYHG++Q    L ++A +IG+P+L+KA+ GGGGKGMR+VE   +   A
Sbjct: 131 AIMTAAQVPLVPGYHGDDQTDATLKAEALKIGFPMLIKAAYGGGGKGMRIVEHEGEIMDA 190

Query: 181 LASCKREAIASFGDDRVLVEKYLTRPRHIEIQVFADGHGHCVYLFERDCSVQRRHQKVLE 240
           + S +REA +SFG+D++L+E+YL +PRH+E+QVFAD  G+ +YL +RDCS+QRRHQKV+E
Sbjct: 191 INSARREAASSFGNDKLLMERYLRQPRHVEVQVFADTFGNAIYLSDRDCSIQRRHQKVVE 250

Query: 241 EAPAPGMSEERRAAMGEAAVAAARAVGYVGAGTVEFIANQDGSFYFMEMNTRLQVEHPVT 300
           EAPAPG+S+E RA MGEAAVAAA+A+ YVGAGT+EF+ + D SFYFMEMNTRLQVEHPVT
Sbjct: 251 EAPAPGLSDELRAQMGEAAVAAAKAIDYVGAGTIEFLLDTDNSFYFMEMNTRLQVEHPVT 310

Query: 301 EMITGLDLVEWQLRVAAGQALPLKQEQLRIHGHAIEARIYAENPEKGFLPAIGTLTRMRS 360
           EM+TG DLV+WQL VA+GQ LPLKQ+++RIHGHA E RIYAE+P+  FLPA G L  +R 
Sbjct: 311 EMVTGQDLVKWQLMVASGQPLPLKQDEVRIHGHAFEVRIYAEDPQNEFLPASGKLNFLRE 370

Query: 361 AAAVEFRLGQSAPGDPAHVRIDAGVREGDAISPFYDPMIAKLIVWGPDRDAALRNMQRAL 420
                       P    +VRID+G+RE D IS FYDPMIAKLIVW   R  AL+ +  AL
Sbjct: 371 ------------PEQSKYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHAL 418

Query: 421 AQYQVVGLATNIAFLQRLVAGQAFSTAALDTGLIERHRDTLFPPPSSPDTETLALAIAAI 480
             YQ+ GL  NI FL  +    AF+ A   T  I R+ D L    SS + +T ALA AA+
Sbjct: 419 ESYQISGLKHNIEFLANIAEHPAFAKADFSTDFINRYGDALIGSASS-EADT-ALAFAAL 476

Query: 481 LQ----------QEHAQAERSDPWSQRNGWRLNTRLLRTLRFEHDAGDTTVQLDYAGDGQ 530
            Q          Q    A+   PW Q +G+RLN+    ++    DA +   QL     G 
Sbjct: 477 YQVLARKEAAKAQAINSADPDSPWGQVSGFRLNSVSQHSIALLDDAHELQ-QLVLLDFGD 535

Query: 531 HWSLLTN-GQTHALQLHAADG------------DTLIISLDGRTLRADVLREGEWLHVFD 577
           H+ L  N    H L   AADG            D L+  ++G   +  V  +G+   +F 
Sbjct: 536 HYQLSHNRSSQHQLSQSAADGQVSKSLSGELKQDLLLAEINGHKSKVPVSAQGDDFTLFL 595

Query: 578 AHGQHSLRHVDPLAHAGHSEAEGGRLTAPMPGKIVALLVQKGASVAHGTPLLIMEAMKME 637
             G +  R V        S  E  +L APM G +V  LV  GA V  G  LL+MEAMKME
Sbjct: 596 PSGSYHFRAVKTQVVEAESSNE-DKLKAPMNGTVVTHLVDVGAEVKAGQGLLVMEAMKME 654

Query: 638 HTIAAPADGVVEDLLYAVGDQVAEGAQLL 666
           +TI AP DG+V +  +  G+ V++GA LL
Sbjct: 655 YTIEAPFDGIVTEFYFKAGELVSDGAVLL 683