Pairwise Alignments

Query, 406 a.a., RND transporter MFP subunit from Herbaspirillum seropedicae SmR1

Subject, 414 a.a., multidrug transporter subunit MdtA from Klebsiella michiganensis M5al

 Score =  120 bits (300), Expect = 1e-31
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 30/363 (8%)

Query: 59  QAGTAERAKMFVRVAPVRSSAEGQTLALPGTLQGFVQSPISARSGGYLKRWTKDIGAEVK 118
           +AG    A   V+ A   S A  + L+  GT+       + +R  G L       G +VK
Sbjct: 48  RAGRFGAALAPVQAATAASEAVPRYLSGLGTVTAANTVTVRSRVDGQLLAIHFTEGQQVK 107

Query: 119 KGELLAELDTPEIDQQLTQALAAREQAASSMELARSSMARWEALRKKDAVSQQELDERRS 178
            G+LLAE+D  +    L QA     +  +++  AR  +AR++ L K + VS+QELD ++S
Sbjct: 108 AGDLLAEIDPSQFKVALAQAEGQLAKDRATLANARRDLARYQQLVKTNLVSRQELDTQQS 167

Query: 179 AFAQASANLAAADANVGRLRQVEGFKRIVAPFSGIITRRNVDVGDLIDPGAGRALFVLSQ 238
             ++    + A +A V   +    + RI AP  G +  + VD+G+ I  G    + VL+Q
Sbjct: 168 LVSETQGTIKADEAAVASAQLQLNWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQ 227

Query: 239 TDPLRVYVNVPQSYANLVKPGQQVTVTQSELRGRKF--------------EGKVARTAGA 284
           T P+ V   +P++        Q  TV Q++  G+K               EG +      
Sbjct: 228 THPIDVVFTLPEN--------QIATVVQAQKAGKKLVVEAWDRTNKQKISEGSLLSLDNQ 279

Query: 285 IDAATRSMQVEVTLSNADHALLPGAFVQVALPI-KPSGALLVAADTLMFRRDGTLVAAVD 343
           IDA T +++++   +N D AL P  FV   + +     A+++    L    +G  V  ++
Sbjct: 280 IDATTGTIKLKARFTNLDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLN 339

Query: 344 PHNQVRLKKLRLGRNFGQTVEVLDGLQGDEHLILNPSDALAEGDQVEPTLEQPKEPEKQK 403
             N+V    +  G      V +  GL   + ++ +  D L EG +VE         E Q 
Sbjct: 340 DENKVSKHTVTPGIQDSLKVVINAGLSAGDRVVTDGIDRLTEGAKVEVV-------EAQN 392

Query: 404 AAS 406
           AAS
Sbjct: 393 AAS 395