Pairwise Alignments

Query, 446 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 409 a.a., putative sugar-binding periplasmic protein from Phaeobacter inhibens DSM 17395

 Score =  121 bits (303), Expect = 5e-32
 Identities = 103/393 (26%), Positives = 166/393 (42%), Gaps = 16/393 (4%)

Query: 51  TGSLQVLHWWTSASERQAINVVVNQLAKQDIQ-WRDVAIPGGAGMGAAKVLKSMVLANRA 109
           +  L+V HWWTS  E  A+    + +  Q    W D AI  G+G  A  ++ S +L    
Sbjct: 21  SADLEVTHWWTSGGEAAAVTKFADAVNGQTTHNWVDGAI-AGSGTTARPIIISRILGGDP 79

Query: 110 PEVTQL-NGVVFGEWADLGLLLELDNVAVQGNWEKQMFPTVWSLLNN---HGHVVAAPLG 165
              TQL +G    E  + GL+ +L  +A Q  W   + P   SLL++    G +   P+ 
Sbjct: 80  MAATQLTHGRQAEELIEAGLMTDLTELAEQEGWRDIVNPP--SLLDSCTYEGRIYCVPVN 137

Query: 166 IHRINSLYYNVAVFKRYNLSPPKTWDEFDQIVKKLQGSGVVPLAQSAEAWQLATLFENLA 225
           IH    L+ +   F +  +S P+ W EF     KL  +G+VPLA   + WQ    F  L 
Sbjct: 138 IHSTQWLWLSHEAFDKAGMSVPQDWYEFVAAAPKLAEAGIVPLAMGQQGWQQRIAFGALT 197

Query: 226 LAESGPAYYRKLFVEMSPAAYLDARMLHILKRLRALAGAMAQPVRERPWTEVARSMVSGE 285
           +       +RK+ +E         +   +   +   A  +A+    + W      +++G+
Sbjct: 198 VGLVDQDSWRKVSLERDAGVAAGPQYAKVFDAV-VDARELARNSNVQDWNLATNMVITGK 256

Query: 286 AAMLIMGDWAKGELNAWGMEVDQQFGCAPAPGTGEYHLYSTDTLAMFAGNYAH-QPMQET 344
           A   IMGDWA+GE         Q + C P  G  +    S D       + A  +  Q  
Sbjct: 257 AGGQIMGDWAQGEFTLAEQVAGQDYSCLPGMGLNQIIDTSGDAFYFPVIDDAEVRQAQMD 316

Query: 345 LARLTMSPAVQSEYNRIKGSIPVLRAAD-PHMDRCARDSWRTFSKGPMWQAPSLVHRMAT 403
           +A + +S  VQ ++N  KGS+PV    D    + C +      + G +   PS+    + 
Sbjct: 317 MASVLISKEVQVDFNLTKGSLPVRGDVDLSAANDCMKKGLAILADGNV--LPSMDQAFSA 374

Query: 404 DDTTKDAIVAEVQRFFMDRSISEEQAQKRLATI 436
           D     A + ++   F    ++   AQ R A I
Sbjct: 375 D---TQAQIQDLMAEFWASDMAAADAQARYAEI 404