Pairwise Alignments

Query, 446 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 429 a.a., Raffinose-binding protein from Bifidobacterium breve UCC2003

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 100 LKSMVLANRAPEVTQLNG-VVFGEWADLGLLLELDNVAVQGNWEKQMFPTVWSLLNNHGH 158
           L++  + NR P+V   NG + FG +A  G+  +  +  +       M     +L+     
Sbjct: 86  LRTRFVKNRVPDVITFNGDISFGNFAASGVFYDFTDEPIVDTLNPGMVQIAKNLVQTTDS 145

Query: 159 VVAAPLGIH---RINSLYYNVAVFKRYNL---SPPKTWDEFDQIVKKLQGSGVVPLAQS- 211
                 G+      +   YN A+F++  L   +PP TW EF  ++   + +G+ PL  + 
Sbjct: 146 SKKRLYGLPFAGNASGYIYNKALFRKVGLDPENPPTTWAEFTDMLNTFKDAGINPLQGTV 205

Query: 212 AEAW 215
           A+AW
Sbjct: 206 ADAW 209