Pairwise Alignments

Query, 505 a.a., D-ribose transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 521 a.a., m-Inositol ABC transporter, ATPase component (itaA) (from data) from Pseudomonas fluorescens FW300-N2E3

 Score =  409 bits (1051), Expect = e-118
 Identities = 214/497 (43%), Positives = 314/497 (63%), Gaps = 10/497 (2%)

Query: 12  VLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHL 71
           +L +  + K F GVVAL DV   VRPG V+AL+GENGAGKSTL+KI+ GI+QPD G + L
Sbjct: 27  LLEIINVSKGFPGVVALSDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGELRL 86

Query: 72  GGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGRQPLCGTPRRIDWRRMEDEA 131
            G+ V F +   A++ GI  +HQE  +   +S+AENIWIGR+ L G    ID R M    
Sbjct: 87  RGKPVTFDTPLAALQAGIAMIHQELNLMPHMSIAENIWIGREQLNGF-HMIDHREMHRCT 145

Query: 132 RALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGELYR 191
             L  RL ++L    +V +LS+A+R  VEIA+A+S  + ++IMDEPT+A++  E+  L+ 
Sbjct: 146 AQLLERLRINLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITDKEVAHLFS 205

Query: 192 IIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGREV 251
           II  L+  G  +I+I+HK +E++++AD   V RDG +I       +    L+++MVGRE+
Sbjct: 206 IIADLKAQGKGIIYITHKMNEVFSIADEVAVFRDGAYIGLQRADSMDGDSLISMMVGREL 265

Query: 252 GQVFSRAASNTEDQTAPVLEVKHLSHPSEFDDVSFAVRPGEILGFYGLVGAGRSEVMHAL 311
            Q+F        D    ++ V+ L     F  VSF +  GEILG  GL+G+GR+ V  A+
Sbjct: 266 SQLFPVREKPIGDL---LMSVRDLRLDGVFKGVSFDLHAGEILGIAGLMGSGRTNVAEAI 322

Query: 312 FGLSPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQNITLPVLP- 370
           FG++P   G + +DG+ V++  P  AI  G A + EDR+  G    L + +N+ + VLP 
Sbjct: 323 FGITPSDGGEICLDGQPVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPH 382

Query: 371 --GIGFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVVLAKWLATQPRV 428
             G GF  ++  R    +   +C++L +K     Q +  LSGGNQQK +LA+WL T PR+
Sbjct: 383 YAGNGFIQQKALRA---LCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRI 439

Query: 429 LILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRIVVMHQGRVQQV 488
           LILDEPT+GID+G+KA ++R I  L ++G+AVI++SSELPEV+GMSDR++VMH+G +   
Sbjct: 440 LILDEPTRGIDVGAKAEIYRLISYLASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGT 499

Query: 489 FSRAEASAEALAAAASG 505
             R+EA+ E +   ASG
Sbjct: 500 LDRSEATQERVMQLASG 516



 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 6/235 (2%)

Query: 21  RFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHLGGREVRFAS 80
           R  GV   + V F +  GE++ + G  G+G++ + + + GI   D G I L G+ VR + 
Sbjct: 287 RLDGV--FKGVSFDLHAGEILGIAGLMGSGRTNVAEAIFGITPSDGGEICLDGQPVRISD 344

Query: 81  AQDAMRGGITAVHQE---TVMFEELSVAENIWIGRQPLCGTPRRIDWRRMEDEARALFAR 137
              A+  G   + ++   + +F  LSV EN+ +   P       I  + +      +  +
Sbjct: 345 PHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPHYAGNGFIQQKALRALCEDMCKK 404

Query: 138 LEVDLPVRARVKD-LSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGELYRIIGQL 196
           L V  P   +  D LS   +    +AR L    +++I+DEPT  +      E+YR+I  L
Sbjct: 405 LRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRILILDEPTRGIDVGAKAEIYRLISYL 464

Query: 197 RRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGREV 251
              G AVI IS +  E+  ++DR  V+ +G  + + + ++ T+++++ L  G  V
Sbjct: 465 ASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGTLDRSEATQERVMQLASGMSV 519