Pairwise Alignments

Query, 428 a.a., cobalt-zinc-cadmium resistance protein from Herbaspirillum seropedicae SmR1

Subject, 461 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 102/402 (25%), Positives = 173/402 (43%), Gaps = 36/402 (8%)

Query: 48  LPAAISLALEQNKTLAAARKEIEAVEATIIQAGARPNPEFSALMEDFRKSSRT------- 100
           L A +S A+  N+ L AA + +    A++    A   P  SA     R    T       
Sbjct: 60  LSALMSDAMTGNQDLEAAFRRVAQARASLAGTRAGWFPTLSASSNANRSLHNTARTAAAT 119

Query: 101 --TTYQ----LTQPIELGGKRSARIEAAQRTREMALLDYAAKRTEIRAGVIAAYYEVMVA 154
             TTY     L+  ++L GK  A + +A+ T +   L   A    I+  V  AY   + A
Sbjct: 120 EKTTYDVGGDLSWEVDLFGKTRASVLSAEATAQSQALARDALALSIQGEVATAYVTALAA 179

Query: 155 MERQRLAKELLGLAKTSADMTSRRVTAGKISPVEQTKARVAESSAQLELHQADSDVLLAQ 214
            +R  +A+E L  A+    +   +V+ G  +P+EQ + R   +  +  L Q ++D+  AQ
Sbjct: 180 KDRLAIARENLATAREILALIETQVSIGSQAPLEQAQQRSTVAGIEASLPQLEADLAAAQ 239

Query: 215 KKLATFWGSVGNAFQLTDGGVESLPALPSIA--QLTEKVAAGPAVQLAQLEVERRRALAR 272
             LA   G     F++   G+ +L ALP+IA  Q ++ +   P ++ A+  +    A   
Sbjct: 240 TSLAVLLGRAPQGFRIQAPGLNAL-ALPAIAPGQPSDLLERRPDIREAEATLIAANADIG 298

Query: 273 IETSKRTPDVTLSFGNKRDESNARNMWVVGFSVPIPVLDSNKGNELEALKR---VDIARD 329
              S   P +TLS       + +      G      +  +  G   +A KR   +++AR 
Sbjct: 299 AARSAFFPTLTLSASASLSGALSGGTTTAG-----SLAGNLLGTIFDAGKREADLEVARQ 353

Query: 330 ---------ELSIVEVQMQSEAAQSFERLRNAREEAVALRNEIVPGAQSAYQAARTGFEL 380
                      +++    ++E A   E     RE A+A   E V  +  A + ART +++
Sbjct: 354 RWAELAATYRTTVLTALKEAEDALVTEDTGARREVALA---EAVVQSTEALRIARTQYQV 410

Query: 381 GKFAYLDVLDAQRTYFQAKAQYWKALSTAFQAAADLDRLAGN 422
           G   +L VL AQ+T   ++    +A    FQ+A DL +  G+
Sbjct: 411 GDGDFLAVLTAQQTVLSSRDSLAQARGDRFQSAIDLVKALGS 452