Pairwise Alignments

Query, 428 a.a., cobalt-zinc-cadmium resistance protein from Herbaspirillum seropedicae SmR1

Subject, 427 a.a., outer membrane efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score = 97.1 bits (240), Expect = 9e-25
 Identities = 99/396 (25%), Positives = 170/396 (42%), Gaps = 29/396 (7%)

Query: 43  PRLLSLPAAISLALEQNKTLAAARKEIEAVEATIIQAGARPNPEFSALMEDFR------- 95
           P+ L+L  A++L L Q+  L     +   +E  I QA     PE   ++ED         
Sbjct: 39  PQTLTLADAVTLTLLQHPELQIFNSQQRVMEGRIQQASVGERPEIGLMIEDALGTGEHSA 98

Query: 96  -KSSRTT---TYQLTQPIELGGKRSARIEAAQRTREMALLDYAAKRTEIRAGVIAAYYEV 151
            KS ++T   ++ L Q +      +A+ EA Q   E  +     K  ++ + V   + ++
Sbjct: 99  LKSMQSTLSFSWLLQQDLIDSRVNTAKTEATQLDIEKQI-----KALDLSSQVAKHFIDL 153

Query: 152 MVAMERQRLAKELLGLAKTSADMTSRRVTAGKISPVEQTKARVAESSAQLELHQADSDVL 211
           +V  ER +L       AK      ++RV AGK S VE   A+       L +   + ++ 
Sbjct: 154 LVKQERLKLNLIAEKQAKEVVKTVAKRVQAGKSSAVETQLAKAELIRRGLAVEDIEHELK 213

Query: 212 LAQKKLATFWGSVGNAFQLTDGGVESLPALPSIAQLTEKVAAGPAVQ---LAQLEVERRR 268
            +Q +LA+ WG    +++  +G +  +PA+PS+      +   P  Q    AQ   + + 
Sbjct: 214 ASQYQLASQWGKPKASYRF-NGNLLDMPAVPSVDSQLNLLKKHPRFQQFATAQRIAQSQM 272

Query: 269 ALARIETSKRTPDVTLSFGNKRDESNARNMWVVGFSVPIPVLDSNKGNELEALKRVDIAR 328
            LARIE     P   ++ G +R E++     V G S+P    D N G       + D+  
Sbjct: 273 ELARIEAK---PQWQVTAGVRRYEASDDFGLVAGISIPWGSSDRNAGTIAALQAQQDVLA 329

Query: 329 DELSIVEVQMQSEAAQSFERLRNAREEAVAL---RNEIVPGAQSAYQAARTGFELGKFAY 385
           +E + +   MQ++ AQ +  L+     A  +   R++IVP  + A   A   F+ G  +Y
Sbjct: 330 NEQNAL---MQAQDAQLYVLLQEMAHSAHVIDTVRSDIVPTLEKALSEASNAFDKGLLSY 386

Query: 386 LDVLDAQRTYFQAKAQYWKALSTAFQAAADLDRLAG 421
               D  R    A+ Q   A  +      ++ RL G
Sbjct: 387 NQYNDVYRELLSAQYQLLDAFESLHLQHIEIQRLTG 422