Pairwise Alignments

Query, 289 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Herbaspirillum seropedicae SmR1

Subject, 426 a.a., putative cell-cycle protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 16/164 (9%)

Query: 34  DVIMACMSGGADSYTMLDTLR---YLQSVAPVKFEIIAVNLDQKQPGFPEHILPEYFERI 90
           D ++  +SGGADS  +L  L    Y    A   F     +L  ++    E  + +  ++ 
Sbjct: 20  DKLLVALSGGADSVALLRVLHTAGYQCEAAHCNF-----HLRGEESNRDERFVRQLCQKY 74

Query: 91  GVRYRIVEEDTYSIVKDKIAPGKTTCSLCSR-LRRGILYRVAKELGATKIALGHHRDDIL 149
           G+R  I + +T     +K    + +  + +R LR     ++ +E GA  IA+ HH+DD +
Sbjct: 75  GIRLHITDFNTTQYATEK----RISIEMAARELRYNWFEKIKEECGAHVIAVAHHQDDSV 130

Query: 150 HTFMLNMFYGGKIKTMPPKLIADDGENVVIRPLAYVREPDIKKY 193
            T + N+  G  I  +   L        ++RPL  +   +I +Y
Sbjct: 131 ETMLFNLIRGTGITGL---LGIRPRNGAIVRPLLCINREEIIRY 171