Pairwise Alignments

Query, 1199 a.a., MFS transporter from Herbaspirillum seropedicae SmR1

Subject, 1156 a.a., branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data) from Pseudomonas stutzeri RCH2

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 670/1170 (57%), Positives = 831/1170 (71%), Gaps = 31/1170 (2%)

Query: 13   LDDVSLDDKYTLERGRVFMTGIQALVRLPMLQRQYDQRAGLNTAGFITGYRGSPLGAVDQ 72
            L ++ LDDKY L  G +++TG QAL RLPMLQ Q DQ  GLNT GFI+GYRGSPLG +D+
Sbjct: 3    LAEIRLDDKYRLATGHLYLTGTQALTRLPMLQHQRDQARGLNTGGFISGYRGSPLGGLDK 62

Query: 73   TAEKARKYLEAKQIKFHPGMNEDLAATSVWGTQQVNLFKGAQYDGVFSLWYGKGPGVDRC 132
            +  +AR YL+   I F PG+NE+LAAT+VWG+QQ NLF GA+YDGVF++WYGKGPGVDR 
Sbjct: 63   SLWEARDYLKQHAIHFQPGVNEELAATAVWGSQQTNLFPGAKYDGVFAMWYGKGPGVDRA 122

Query: 133  GDVFKHANMAGTSRHGGVLVIAGDDHAAKSSTAAHQSEHILKACGIPVLYPSSVQEYLDY 192
            GDVFKHAN AG S  GGVL++AGDDH  KSST  HQSEH   A  IPVL P++VQE LDY
Sbjct: 123  GDVFKHANAAGVSPQGGVLLLAGDDHGCKSSTLPHQSEHAFIAASIPVLNPANVQEILDY 182

Query: 193  GLHGWAMSRYTGLWVAMKCVTDLVESGMSVMIDPERVQIQLPADFELPPDGLNIRQPDTV 252
            G+ GW +SRY+G WVA+K + + V+S   V +DP RVQ ++P DFELP DG++IR PD  
Sbjct: 183  GIIGWELSRYSGCWVALKTIAENVDSSAVVEVDPLRVQTRIPEDFELPEDGVHIRWPDPP 242

Query: 253  LGQEARMINYKWYAALAYARANKLNRIIWDSPRARIGIITAGKSYLDTRQALEDLGIDEQ 312
            L QE R+  YK YAA A+ARAN LNR++ DSP  R+GIIT GKSYLD RQAL+DLG+DE 
Sbjct: 243  LAQEKRLNLYKIYAARAFARANNLNRVMLDSPNPRLGIITTGKSYLDVRQALDDLGLDEA 302

Query: 313  AARDIGIRLYKVGMTWPLEAEGVREFAQGLDEILVVEEKRQILEYQLKEELYNWRDDVRP 372
                +G+R+ KVGM+WPLE   V EFAQGLDEILVVEEKR I+E QL  +LYNW    RP
Sbjct: 303  LCASVGLRVLKVGMSWPLEPVSVHEFAQGLDEILVVEEKRSIIEDQLTGQLYNWPVSKRP 362

Query: 373  RVVGKFDDTGEWSGSQREGHGNWLLPATYELNPAQIARAIATRISRYFAGHPVEQQVRAR 432
            RVVG+FD+            GN LLP   EL PA IAR IA R++  +        ++AR
Sbjct: 363  RVVGEFDE-----------QGNSLLPNLSELTPAMIARVIAKRLAPIY----TSDSIQAR 407

Query: 433  VAYLEAKEATLNISSKPDPDKDRIPHFCSGCPHNTSTKLPEGSRGLAGIGCHYMVTWMDR 492
            +A+L AKE  L   S       R PH+CSGCPHN+STK+PEGSR  AGIGCHYMV WMDR
Sbjct: 408  LAFLAAKEKALAARSY---STVRTPHYCSGCPHNSSTKVPEGSRASAGIGCHYMVQWMDR 464

Query: 493  ETKLFTHMGGEGVTWVGQAPFTDEKHVFANLGDGTYFHSGLLAVRASVAAKVNITYKILY 552
             T+ FT MGGEGV W+GQAPFTD  H+F NLGDGTYFHSG LAVRA+VAA VN+TYKILY
Sbjct: 465  RTETFTQMGGEGVNWIGQAPFTDTPHMFQNLGDGTYFHSGSLAVRAAVAAGVNVTYKILY 524

Query: 553  NDAVAMTGGQEFDGPLDPAMISRQLAAENVRPIIVVTDEPDKYPVGTQWAEGVTIRHRSE 612
            NDAVAMTGGQ  DG L    +SRQ+  E V+ I +V+DEPDKYP    +A   +  HR E
Sbjct: 525  NDAVAMTGGQPIDGELRVDQLSRQIFHEGVKRIALVSDEPDKYPSRDTFAPITSFHHRRE 584

Query: 613  LDAVQRELREQPGVSAMIYDQTCASEKRRRRKRNAYPDPAKRAVINEAVCEGCGDCSVQS 672
            LDAVQRELRE  GVS +IYDQTCA+EKRRRRKR    DPAKRA IN AVCEGCGDC  +S
Sbjct: 585  LDAVQRELREFKGVSVIIYDQTCATEKRRRRKRGKMEDPAKRAFINPAVCEGCGDCGEKS 644

Query: 673  NCLSVEPLETEFGRKRQINQSSCNKDYSCVNGFCPSFVTVEGGQLKKPARAQADVGPALP 732
            NCL+V PLETE GRKR+I+Q++CNKD+SCV GFCPSFVTV GG L+KP      +  A  
Sbjct: 645  NCLAVLPLETELGRKREIDQNACNKDFSCVEGFCPSFVTVHGGGLRKPEAVAGGIEAA-- 702

Query: 733  SLPEPVLPGLAQPYGILVTGVGGTGVITIGQIIAMAAHVEGRACSVLDMSGLAQKGGPVM 792
            +LPEP  P L +P+ +L+ GVGG+GV T+G ++ MAAH+EG+ C+VLD +GLAQK GPV 
Sbjct: 703  TLPEPQHPTLDRPWNVLIPGVGGSGVTTLGALLGMAAHLEGKGCTVLDQAGLAQKFGPVT 762

Query: 793  SHVRVAEDAAHIHSTRVGTGMADLVIGCDVIVTASRDALSRMGEGRTHAAVNSTQMPTAA 852
            +HVR+A   + I++ R+  G ADL++GCD+IV A  ++L+R+ E  ++A VNS +  TA 
Sbjct: 763  THVRIAAKQSDIYAVRIAAGEADLLLGCDLIVAAGDESLTRLNEQISNAVVNSHESATAE 822

Query: 853  FVRNPDWQFPTASSEGEIARACGRDNLSLVDAGRIATALMGDAIATNMFMLGYAWQKGWV 912
            F RNPD Q P A+    I+ A G D    VDA R+AT L+GD+IATN+F+LG+A+Q+G +
Sbjct: 823  FTRNPDAQVPGAAMRQAISDAVGADKTHFVDATRLATRLLGDSIATNLFLLGFAYQQGLL 882

Query: 913  PLSEAALLRAIELNALQVEFNKQAFAWGRAAAHDVAFVLAAAGRNGMSAQVIEFKRTPTL 972
            P+S  A+ +AIELN +  + N QAF WGR A  +   V   A    M   + +     TL
Sbjct: 883  PISAEAIEKAIELNGVSAKLNLQAFRWGRRAVLEREAVEQLARPVDMVEPICK-----TL 937

Query: 973  DELVERRVAFLTDYLNAAYARSYRDFVEQVRARESALGEAGRGLKLSRAVASYLFKLMAY 1032
            +E+V+ RV FLT Y +A  AR YR  VE+VR  +SA       L LS+AVA Y FKL+AY
Sbjct: 938  EEIVDWRVDFLTRYQSAGLARRYRQLVERVRDADSA-----DDLALSKAVARYYFKLLAY 992

Query: 1033 KDEYEVARLHADPAFRAKIAGMFEGDYKLRFHLAPPLLAKRDD-KGHLRKQAFGSWMMPV 1091
            KDEYEVARL+++P FR ++   FEGDYKL+FHLAP  LAKRD   G  RK+  G W++ +
Sbjct: 993  KDEYEVARLYSEPEFRQQLEAQFEGDYKLQFHLAPAWLAKRDPVTGEPRKRELGPWVLNL 1052

Query: 1092 FGVLARLRFLRGTALDPFAYTEERRQERALITEYRATLSRLLDRLTPENLEQITAVARIP 1151
            FGVLA+ RFLRGT LDPF Y  +RR ER LI+EY  T+  LL +L P N     A+A +P
Sbjct: 1053 FGVLAKFRFLRGTPLDPFGYGHDRRVERQLISEYEKTVDELLAQLKPTNYRTAVAIAALP 1112

Query: 1152 EEIRGYGHVKERHLKAAMEKQAALLAQLGQ 1181
            E+IRGYG VKER +  A +++  L  QL +
Sbjct: 1113 EQIRGYGPVKERSIAKARQQEKLLREQLAK 1142