Pairwise Alignments

Query, 485 a.a., amino acid permease from Herbaspirillum seropedicae SmR1

Subject, 485 a.a., amino acid permease from Bifidobacterium breve UCC2003

 Score = 64.3 bits (155), Expect = 9e-15
 Identities = 93/422 (22%), Positives = 170/422 (40%), Gaps = 63/422 (14%)

Query: 43  GFPIGIMLGNGAGTPALLVLILLLLLAFSVG-----YTTMARHVTNAGGFYAFSSAGLGG 97
           G  I ++ G GA T    + +  LL A   G     Y   A     +G  Y+++    G 
Sbjct: 38  GTGIFVLTGKGALTAGPALSVSFLLAAVCCGFAGLCYAEFAAMAPVSGSAYSYAYLAFGE 97

Query: 98  IAGGVAGVLAMFAYNI----LQIGLYGMFGGVMSATFSDIFGIHLAWWVYAA-------- 145
           +   V G   +  Y +    +  G  G F  ++       FG+HL   + AA        
Sbjct: 98  LIAFVIGWDLILEYALQAATVSAGWSGYFNKLLEG-----FGLHLPVELTAAYGTTPGVT 152

Query: 146 --------VAMLSVAILGYRNIDLSARLLSVVVVAEYLAVLVLDFCILRSGGDRGVNLDS 197
                   V +L +  +    I+ + R   V+V+ + LA++VL F +      +  N   
Sbjct: 153 TYFNLPGFVIVLIITWVLSIGINQTKRTNDVMVLIK-LAIIVL-FIVCAVWYVKPSNWQP 210

Query: 198 FSPANVMSGTPS----IGLLFA----FAAFIGFEATTIYGEEAKNPKRAIPIATYTSVLL 249
           FSP  + +  P      G++ A    F +FIGF+A +   EE  NP + +P     S+ +
Sbjct: 211 FSPYGIYTFQPGSTQPYGIVPAASIVFFSFIGFDAVSSSAEETVNPNKTLPRGILLSLAI 270

Query: 250 IGGFYGISLWSLIIGAGSDKVVKLLEGMQDPTAFIYLMSDHYAGPGLTAVIRILFVISIY 309
               Y I     +I  G     +  + +  P A + L +       L  ++ +  +I + 
Sbjct: 271 STVLYVI---MTMIMTGVVPYKEFAKYIDAPVAGVILET---GMNWLAVIVNLGALIGMT 324

Query: 310 AGLLAFHSSAARYFYAVGRDGLLHRLLGTTHRTYQSPHMGS---ALQSAIAAVVVTLFAV 366
             +L      +R  YA+ RDGL     G  H  Y++P  G+    + +AIA   + +  +
Sbjct: 325 TVMLVQLYGQSRICYAMSRDGLFPEFFGHVHEKYRTPFKGTWFFGILTAIAGGFININVL 384

Query: 367 FDAHPILHLFAWFSSLAALCLMLLMIMTSAAVICYFRRRPEACNSAWRVRILPAVSLLAL 426
           F+             L  +  +   I+ SA ++   + +P+A +  +R   +P   +LA+
Sbjct: 385 FE-------------LVNIGTLSAFIIVSAGILWMRKTQPDA-HRGFRAPGVPVTPILAI 430

Query: 427 LY 428
           ++
Sbjct: 431 VF 432