Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 301 a.a., formamidopyrimidine-DNA glycosylase from Sinorhizobium meliloti 1021

 Score =  188 bits (478), Expect = 1e-52
 Identities = 124/304 (40%), Positives = 166/304 (54%), Gaps = 34/304 (11%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPELPEVE  +RG+AP +EG  +    +R   LR+PFP      + GR I +  RR KYL
Sbjct: 1   MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFANAVAGRRIIALSRRAKYL 60

Query: 61  LIHFDHGTLIV-HLGMSGHLRI----LPPGIAP-------------QKHDH--FDLEVGG 100
           +I  + G +I+ HLGMSG  RI    +  G  P             +KHDH  F L+ G 
Sbjct: 61  MIELEGGDVIIAHLGMSGSFRIEKGPIEAGADPATPGAFHHPRGKDEKHDHVVFHLDGGS 120

Query: 101 QVMRM--TDPRRFGAILWHDLA-DGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAP 157
              R+   DPRRFG   + DLA   A+ +H+ LR LG EP      A  L  +  G+  P
Sbjct: 121 GPARVIYNDPRRFG---FMDLARRSALADHVFLRGLGEEPTGNALDAAYLATRFAGKIQP 177

Query: 158 IKQVLLAGDIVVGVGNIYASESLFKARIHPKTAAG----KISLPRYERLA--QAIRETLA 211
           +K  LL    + G+GNIY  E+L+++ + PK +AG    K   P+   +A  + IR  +A
Sbjct: 178 LKAALLDQRTIAGLGNIYVCEALWRSGLSPKRSAGTLVDKRGRPKQALIALTERIRAVIA 237

Query: 212 AAIEQGGSSLRDFIAVNGQSGYFQQNYFVYNRTGEACRI--CATPIRQIKQGQRSTFYCV 269
            AI  GGSSL+D I  +G  GYFQ ++ VY+R GEACR   C   + +I Q  RSTFYC 
Sbjct: 238 DAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFYCP 297

Query: 270 SCQK 273
            CQK
Sbjct: 298 HCQK 301