Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  253 bits (645), Expect = 4e-72
 Identities = 134/273 (49%), Positives = 172/273 (63%), Gaps = 5/273 (1%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPELPEVEVTR+G+APHLEG  V  +++R++ LRWP P   + ++ G+ I    RR KYL
Sbjct: 1   MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVPELAQNIV-GQTILGVRRRAKYL 59

Query: 61  LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEV-GGQVMRMTDPRRFGAILWHDL 119
           LI    GT IVHLGMSG LR+LP     +KHDH DL +  G+V+R  DPRRFGA LW +L
Sbjct: 60  LIDTQAGTTIVHLGMSGSLRVLPKNTPVEKHDHIDLVMQNGRVLRFNDPRRFGAWLWSEL 119

Query: 120 ADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVVGVGNIYASES 179
            + A   H LL  LG EPL   F A  L    +G+   IK  L+   IVVGVGNIYA+E+
Sbjct: 120 PEAA---HPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDNAIVVGVGNIYANEA 176

Query: 180 LFKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQSGYFQQNYF 239
           LF A IHP+  AGK+   R   L   ++  L  AI+QGG++L+DF   +G+ GYF Q   
Sbjct: 177 LFAAGIHPEAEAGKVDAERLTLLTAEVKTILTQAIKQGGTTLKDFTNADGKPGYFAQKLH 236

Query: 240 VYNRTGEACRICATPIRQIKQGQRSTFYCVSCQ 272
           VY R GE C  C   + +I+ GQR+T +C  CQ
Sbjct: 237 VYGRGGETCTECGHLLSEIRLGQRTTVFCSLCQ 269