Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 275 a.a., formamidopyrimidine-DNA glycosylase Fpg from Dechlorosoma suillum PS

 Score =  261 bits (668), Expect = 9e-75
 Identities = 139/277 (50%), Positives = 179/277 (64%), Gaps = 6/277 (2%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPELPEVEV+R G+ P+L G+ + GV +R   LR      L     GR ++   RRGKYL
Sbjct: 1   MPELPEVEVSRLGLLPYLPGQVLQGVSLRAPRLRHELSPALAERPVGRRLKRVERRGKYL 60

Query: 61  LIHFDH----GTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILW 116
           L  F+     G +I+HLGMSG LR++PPG  P KHDH DL   G+ +R  DPRRFG +LW
Sbjct: 61  LFDFESDGGGGWIILHLGMSGSLRLVPPGTPPSKHDHVDLHFPGRTLRYRDPRRFGTLLW 120

Query: 117 HDLADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVVGVGNIYA 176
            D     V +H LL  LG+EPL + F    L +  R R APIKQVL+    +VGVGNIYA
Sbjct: 121 VD--GPVVLDHPLLAPLGVEPLSDAFDGAWLHQALRRRQAPIKQVLMDAHCIVGVGNIYA 178

Query: 177 SESLFKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQSGYFQQ 236
           +ESLF++RI P T A ++S  R +RLA  +RE LA +I  GGSS+RD++  +G +G FQ 
Sbjct: 179 AESLFRSRISPLTPACRLSRQRCDRLAATVREVLAESIAAGGSSVRDYVHSDGGAGSFQL 238

Query: 237 NYFVYNRTGEACRICATPIRQIKQGQRSTFYCVSCQK 273
              VY+R GE C++C  PIR+I QG RSTFYC  CQ+
Sbjct: 239 IVAVYDREGEPCQVCGGPIRRITQGGRSTFYCPRCQR 275