Pairwise Alignments

Query, 285 a.a., nucleotide-binding protein from Herbaspirillum seropedicae SmR1

Subject, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

 Score =  249 bits (635), Expect = 6e-71
 Identities = 139/287 (48%), Positives = 195/287 (67%), Gaps = 13/287 (4%)

Query: 1   MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIQEGASRLAVATDARS 60
           MR+++++G SG+GKSVAL VLED GY+CVDNLP SLL   +Q+ +Q     +AV+ D R+
Sbjct: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQS-VQGSQQNVAVSIDIRN 59

Query: 61  ADSLATLRHDI-DQLRADGHDVKVFFLTASSETLITRFSETRRSHPLSHRLLPGGNPSDR 119
                +L  D+ DQL+ + +DV + FL AS ETL+ R+SETRR HPLS   L    PS  
Sbjct: 60  LPKEPSLVQDVLDQLKQN-NDVSMLFLDASKETLLKRYSETRRIHPLS---LSQSKPS-- 113

Query: 120 LTLSECIELEKEMLADMQE-IGLVMDTSQLSSNKLRGWIKDLVD-LERSPLTLLIESFAF 177
             L++ IELEK++L  ++E   L++D+S  S ++L   ++  ++  ER  L ++ +SF F
Sbjct: 114 --LAQAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGF 171

Query: 178 KHGLPLDADLVFDVRMLPNPHYDLALRPLTGRDQPVIDFLDADAEVAEMFNDIRRFVEKW 237
           K+GLP DAD VFDVR LPNPH++  LRPLTG D P+  FL+  +EV E+   I++F E W
Sbjct: 172 KYGLPTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYW 231

Query: 238 LPSFKGDNRSYLTVAIGCTGGQHRSVYLAERLASHF-RATEQVVCRH 283
           LP  + +NRSYLT+AIGCTGG+HRSVYL ++L  +F +   QV  RH
Sbjct: 232 LPMLEKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRH 278