Pairwise Alignments

Query, 524 a.a., ubiquinone biosynthesis protein UbiB from Herbaspirillum seropedicae SmR1

Subject, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

 Score =  484 bits (1246), Expect = e-141
 Identities = 261/496 (52%), Positives = 341/496 (68%), Gaps = 7/496 (1%)

Query: 7   RLLKIVRVAILYGLDEIIASEFAP--PRIARIINRIFFWRDLSAPR--GERLRRALEDLG 62
           RL +IV+V + YGLDE++        P +AR    +F+ R+  A +  G+RLR AL++LG
Sbjct: 8   RLYRIVKVQLEYGLDELLPEHHLTRAPLLAR--KSLFWLRNQHADKALGDRLRLALQELG 65

Query: 63  PIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPDLLFATFE 122
           P++IKFGQ++STRRDL PP IA+ L +LQD+V PFD   A + IE+ LGA  +  F  F+
Sbjct: 66  PVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFD 125

Query: 123 RTPVASASIAQVHFATLK-DGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGRR 181
             P+ASASIAQVH A LK +G++V +KV+RP +R  ID DI LM+  A  + +   + RR
Sbjct: 126 IKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEARR 185

Query: 182 LKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMERM 241
           LK  EVV E++K L DELDL REAANA QLRRNF  S  L VPE+  D+C+ +V+V ER+
Sbjct: 186 LKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERI 245

Query: 242 HGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGRY 301
           +GI +S    L A G ++  L+  GV +FFTQVFRD FFHADMHPGN+ V+       ++
Sbjct: 246 YGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQW 305

Query: 302 IALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRAC 361
           I LD GIVGTLN  DK YL++NFLAFF RDY+RVA+ H++SGW P DT VDE E A+R  
Sbjct: 306 IGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFEVAIRMV 365

Query: 362 CEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLW 421
           CEPIF +PL +ISFG VLL LF T+RRFN+EVQPQLVLLQKTLL VEGLGRQL P LDLW
Sbjct: 366 CEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLW 425

Query: 422 KTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTEGDSQPQNTE 481
           +TAKP+LE+WM+ Q+G + F+  LK   P +   +PELP L + +L +    + +  N  
Sbjct: 426 QTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLNQRLDNLY 485

Query: 482 LIRKLLAEQRRTNMFL 497
              +    Q+ T  FL
Sbjct: 486 QGYRQSKRQQGTGKFL 501