Pairwise Alignments

Query, 524 a.a., ubiquinone biosynthesis protein UbiB from Herbaspirillum seropedicae SmR1

Subject, 549 a.a., ubiquinone biosynthesis protein AarF (RefSeq) from Shewanella amazonensis SB2B

 Score =  462 bits (1189), Expect = e-134
 Identities = 242/487 (49%), Positives = 331/487 (67%), Gaps = 18/487 (3%)

Query: 10  KIVRVAILYGLDEIIASEFAPPRIARIINRIFFW---RDLSAPRGERLRRALEDLGPIFI 66
           +++R  + YGLD+++     P    +++    FW   R      GERL+ A+++LGP++I
Sbjct: 11  QVIRTLLHYGLDDVLPPTLLPGYF-KLLRLCLFWVRNRHKDKCGGERLKLAMQELGPVYI 69

Query: 67  KFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPDLLFATFERTPV 126
           KFGQ+LSTRRDL+  + A EL++LQDRVP FDS LA + IE  L A  D LF  F+ TP+
Sbjct: 70  KFGQMLSTRRDLLSDEWAQELSMLQDRVPAFDSALAREAIEAELKAPIDSLFDDFDDTPL 129

Query: 127 ASASIAQVHFATLK-DGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGRRLKAK 185
           ASASI+QVH ATLK +G++V +KVLRP +   I  D+ LM   A W+ RL  +G RL+  
Sbjct: 130 ASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELMLQVATWVNRLLGEGNRLRPV 189

Query: 186 EVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMERMHGIP 245
           EVV ++   +  EL+L  EA NA++LR NF +S  L +P +Y + C P ++VMER+ GIP
Sbjct: 190 EVVEDYQNTILGELNLKLEALNATKLRNNFLDSDALYIPYVYEELCHPRLMVMERIDGIP 249

Query: 246 ISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGRYIALD 305
           +S  E L A+G +L  L+  GVE+FFTQVFRD FFHADMHPGNI +S        YI LD
Sbjct: 250 VSDIEALNAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREHPENPFYIGLD 309

Query: 306 FGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPI 365
            GI+G+LN+ DK YL++NFLAFF RDY R+A+ ++ESGW   DT +   E AV+  CEP+
Sbjct: 310 CGIMGSLNEEDKRYLAENFLAFFNRDYHRIAQLYVESGWVSADTDILAFEQAVKLVCEPM 369

Query: 366 FDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAK 425
           F++PL +ISFG VLL LF+T+RRF++ VQPQLVLL+KTLL +EGLGRQL P LDLW+TAK
Sbjct: 370 FNKPLNEISFGHVLLELFRTARRFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAK 429

Query: 426 PYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTEGDSQPQNTELIRK 485
           P+LERWM+EQ+G +   ++++  +P +S  LPE P L +              N +L RK
Sbjct: 430 PFLERWMAEQVGPKAIFKKVQTNLPFWSDKLPEFPELIY-------------DNLKLGRK 476

Query: 486 LLAEQRR 492
           LL  Q++
Sbjct: 477 LLGSQQQ 483