Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 314 a.a., pca operon transcription factor PcaQ from Ralstonia sp. UNC404CL21Col

 Score =  112 bits (280), Expect = 1e-29
 Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 3/298 (1%)

Query: 28  SRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIEAT 87
           SR+RFR ++   A+ ++ +L +AAE +H++QPA +K L E+E   GV L +R  +G   T
Sbjct: 11  SRIRFRHLSCFVAIAQERNLRRAAERLHLSQPAVSKTLGELEALAGVQLVERGRQGARLT 70

Query: 88  ELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTI-MGAAPFVTRALSRLREIQP 146
             G   +R+A  +   + +    L          + +G +   A+  + +A++ L   +P
Sbjct: 71  AAGEQFLRHAVGVTQALESATAALMGSTDASAPVVHVGALPTVASSLLPQAIAHLHAQRP 130

Query: 147 EVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHPLA 206
              + +   T+   L  L  G +D ++GR +   +     +E+L  EP+ +V    HPL 
Sbjct: 131 HAGVRLRTGTNVELLTALKAGELDFIVGRMAEPDRMQGLSFELLYAEPLALVVRPGHPLL 190

Query: 207 T--AQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLLAQ 264
           T       LQ + +   ++ +     R   E  F+  G+++P  V ET S  V   L  +
Sbjct: 191 TQAGASASLQAVLDYPLVIATPGTVPRHHTEALFQTHGLRLPAGVTETLSVSVARLLACR 250

Query: 265 SNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQ 322
           S+ V + P   A    A   L  L +      E  G++ R   T S LA  F+++L +
Sbjct: 251 SDAVWITPERAAGDDLAHGQLARLDIVTSGTKEPVGLLRRSAATPSELASAFMELLTE 308