Pairwise Alignments

Query, 233 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 218 a.a., alanine racemase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  137 bits (344), Expect = 2e-37
 Identities = 89/223 (39%), Positives = 127/223 (56%), Gaps = 11/223 (4%)

Query: 8   LQHVQQQIAAAAERAGRPAGAVQLLAVSKTFGPQAVLEAVRAGQRAFGENYLQEALEKIA 67
           +  +  +I AAA +AGR    + L+AVSK      V   +  G R +GEN +QEA  K  
Sbjct: 3   VSEITARIGAAARKAGRDPAEITLIAVSKVQPLDRVEAVLAEGHRVYGENRVQEAQGKWP 62

Query: 68  ALPLLAPDVPLQWHFIGPIQSNKTRPIAEHFDWVHSVDRLKIAQRLSEQRPAALGALNVC 127
           A       + L  H IGP+QSNKTRP  E FD +H+VDR K+A+RL++       + ++ 
Sbjct: 63  AFREKYSGIDL--HLIGPLQSNKTRPAVELFDAIHTVDRAKLARRLADHAQERGQSPDIF 120

Query: 128 LQVNISGEDSKSGLDPAELPAVAAQVAQLPGLKLRGLMAIPAPSEDVTQQRAAFAAVRSL 187
           +QVN   E  K+G   +E+ A+  +   L  L L+GLM IP   E+ +   A       L
Sbjct: 121 VQVNTGDETQKAGCALSEVDALVTECRAL-DLPLKGLMCIPPIDEEPSLHFA-------L 172

Query: 188 LAQLQAQGLALDTLSMGMSADLDAAVAEGASIVRIGSAIFGAR 230
           LA+L A+   L  LSMGMS D ++A+A+GA+ +R+GSAIFG R
Sbjct: 173 LAKLAARN-GLTGLSMGMSGDFESAIAQGATHIRVGSAIFGDR 214