Pairwise Alignments

Query, 233 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 238 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  233 bits (594), Expect = 2e-66
 Identities = 121/232 (52%), Positives = 164/232 (70%), Gaps = 2/232 (0%)

Query: 1   MSSIAQNLQHVQQQIAAAAERAGRPAGAVQLLAVSKTFGPQAVLEAVRAGQRAFGENYLQ 60
           M++IA  L   Q +IA AA++  R   +++LLAVSKT   + ++ A  AGQR FGENY+Q
Sbjct: 1   MTTIADRLAVAQSRIAQAAQKCARLPHSIRLLAVSKTKPMEDIIAAYNAGQRCFGENYVQ 60

Query: 61  EALEKIAALPLLAPDVPLQWHFIGPIQSNKTRPIAEHFDWVHSVDRLKIAQRLSEQRPAA 120
           E + KI AL    PD+  +WHFIGP+QSNKT  +A+HFDW+H++ R KIAQRL+EQRPA 
Sbjct: 61  EGVTKIEALKATHPDI--EWHFIGPLQSNKTALVAQHFDWMHTLSREKIAQRLNEQRPAH 118

Query: 121 LGALNVCLQVNISGEDSKSGLDPAELPAVAAQVAQLPGLKLRGLMAIPAPSEDVTQQRAA 180
           L  L VC+Q+NIS E +KSG+D  ++  +A  ++QLP L+LRGLMAIP+ + D+ QQ   
Sbjct: 119 LAPLKVCIQINISDEYTKSGIDAEQMLPLADSISQLPHLQLRGLMAIPSATNDIAQQTDE 178

Query: 181 FAAVRSLLAQLQAQGLALDTLSMGMSADLDAAVAEGASIVRIGSAIFGARHY 232
            + ++ L   L+    A+DTLSMGMS DLD AV  G+++VRIGSAIFG R Y
Sbjct: 179 LSKLKQLFDTLKQHYPAVDTLSMGMSNDLDVAVECGSTMVRIGSAIFGERDY 230