Pairwise Alignments

Query, 437 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 431 a.a., extracellular solute-binding protein family 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  145 bits (367), Expect = 2e-39
 Identities = 116/434 (26%), Positives = 184/434 (42%), Gaps = 22/434 (5%)

Query: 8   IATGVLATITSSAFAATA----ITWWH--SMTGALGERVNALADDFNKTQGDYKIVPVYK 61
           +A   L ++T  A  A A    +T++   S+ G + + V  + + F K   D K+ PVY 
Sbjct: 10  LAAAALLSLTLLAGTALAEKVNLTFYFPVSVGGPITKIVEGMTEQFMKEHPDIKVTPVYA 69

Query: 62  GTYDESMSAAIAAYRAGNAPAILQVFEVGTATMIYAKGAVKPVYEVMHQAGEKFDQNAYV 121
           G Y E+++ A+ A R G  P +  +      T+I     V   Y+ + +  E     A+ 
Sbjct: 70  GIYRETLTKALTALRGGEPPHVAVLLSTDMYTLIDEDAVV--AYDDILKPEEMGFTKAFF 127

Query: 122 PAVAGYYSTPKGMMSFPFNSSTTIMFYNKDMFAKAGLDPEKPPVTWQEFVGMAAKIKASG 181
           P       T       PF  ST +M++NK+ F  AGLDPEK P  W E V M  K+    
Sbjct: 128 PGFMRNSQTGGKTWGIPFQRSTIVMYWNKEAFKAAGLDPEKGPANWNELVEMGKKLTVRD 187

Query: 182 AACAYTTTWQSWVHLESFSTWHNVELATKNNG--FGGLDARLKMNSPLHVRHIENLSNWA 239
           A+    T W   +    ++ W    LA +N          R   ++P  +  ++ L + A
Sbjct: 188 AS-GKVTQWGVAIPSTGYAYWMFQALAIQNGVELMNAEGTRTDFDNPKAIEALQFLVDLA 246

Query: 240 KQGYFTYAGRKDEANA--KFNAGECAIITGSSSAYADIRKNAKFKFGVATLPYYNDVQGA 297
            +   +  G  D A     F   + AI+  ++    ++R NA F FGV  LP       A
Sbjct: 247 YKHEVSPKGTIDWATTPRDFFERKSAIMWTTTGNLTNVRTNAPFPFGVGMLP-----ASA 301

Query: 298 PQNTVIGGASLWVMNGKKADEYKGVAKFFSYLSKPEVAAKWHQDTGYLPVTKAAYELTKS 357
              +  GG + ++       E K    F  +++  E AA+W  DTGY+ V   A+E    
Sbjct: 302 RPGSPTGGGNFYIFKKATPAERKAAVDFVQWMTSAERAAQWGIDTGYVAVRPDAWETPAM 361

Query: 358 SGFYERNPGTDVAVKQMIVKTTEKSRGLRLGNYAQVRTVFDEELENVWTGKKSAKDALDS 417
             +  + P   VA  Q+     E    L   +  +V    D+ ++   TG K   DAL  
Sbjct: 362 KDYVAKFPVAAVARDQLAHAVPE----LSTHDNQRVTKALDDAIQAAVTGSKKPADALKD 417

Query: 418 AVKRGDELLARFEK 431
           A K  + +L R+ K
Sbjct: 418 AQKEAERILRRYGK 431