Pairwise Alignments

Query, 437 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 443 a.a., sugar ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 110/418 (26%), Positives = 164/418 (39%), Gaps = 53/418 (12%)

Query: 3   MMKTLIATGVLATITSSAFAATAITWWHSMTGALGERVNALADDFNKTQGDYKIVPVYKG 62
           M+  +  T    T  +S+   T IT W     A    + A A  F K   D K+     G
Sbjct: 13  MIAMIAPTAACGTDNASSDGKTEITVW-----AWDNNLKANAKQFMKDNPDIKVTFANAG 67

Query: 63  TYDESMSAAIAAYRAGN-APAILQVFEVGTATMIYAKGAVKPVYEVMHQAGEKFDQNAYV 121
           +  +   A   A  AG+ AP I Q+ E         KGA+K   ++      KF ++ Y 
Sbjct: 68  SGKDEYVALSNAIEAGSGAPDIAQI-EYYAIPEYAIKGALK---DLTDNGAGKF-KDFYT 122

Query: 122 PAVAGYYSTPKGMMSFPFNSSTTIMFYNKDMFAKAGLDPEKPPVTWQEFVGMAAKIKASG 181
           P      +   G+   P +S     FY+K++F KAG+D  +PP TW EF   A KI+A G
Sbjct: 123 PGTWSSVNYAGGIYGLPMDSGPMAFFYDKEVFDKAGID--EPPATWDEFYEDAKKIRAVG 180

Query: 182 ---------AACAYTTTWQSWVHLESFSTWHNVELATKN-NGFGGLDARLKM-NSPLHVR 230
                    A       WQ+  H   +ST  + +  T N  G  G+    K+    +   
Sbjct: 181 SYITNDPGDAGFFNAMVWQAGGH--PYSTSKDGKTVTVNLTGDPGVRKFTKLWQKMIDED 238

Query: 231 HIENLSNWAKQGYFTYAGRKDEANAKFNAGECAIITGSSSAYADIRKNAKFKFGVATLPY 290
            IE  +      ++   G  + A     A    +    +S  A        K+ +A +P 
Sbjct: 239 LIETKTKGTSDDWYRAVGSGEFAGVITAAWAPGMFLNQASEGAG-------KWRIAQMPA 291

Query: 291 YNDVQGAPQNTVIGGASLWVM-NGKKADEYKGVAKFFSYLSKPEVAAKWHQDTGYLPVTK 349
           ++   G  + +  GG+SL ++ + KKAD      KF +Y    + A     D G  P   
Sbjct: 292 WS--AGGHEVSESGGSSLAILSSSKKAD---AAYKFMAYALHNKDAVMSRVDQGGFP--- 343

Query: 350 AAYELTKSSGFYERNPGTDVAVKQMIVKTTEKSRGLRLGNYAQVRTVFDEELENVWTG 407
           A  E  K+  F   N  T V  K    +T E   G +         VF E  +NV TG
Sbjct: 344 ADLESMKNDKFL--NQTTMVNTKG---ETVEYFGGQKF------NAVFAEAAKNVVTG 390