Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 305 a.a., DNA-binding transcriptional regulator OxyR from Klebsiella michiganensis M5al

 Score =  221 bits (563), Expect = 2e-62
 Identities = 117/296 (39%), Positives = 180/296 (60%), Gaps = 7/296 (2%)

Query: 1   MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60
           M + +L+Y+VA+A  +HF  AA++C V+QPTLS  I+KLEDELGV++ ER   +V  T  
Sbjct: 1   MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60

Query: 61  GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120
           G  +V QA  VL +   +KE+A+Q  + +SGPL +G+I TIGPYLLP ++  + +  P++
Sbjct: 61  GLLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTIGPYLLPLIIPMLHQTFPKL 120

Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVLPLYDEEFMVALPRQHKWAERKE 180
            + L E  T +L+  L  G+LD AI+AL         +PL+DE  M+A+   H WA R+ 
Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMMLAIYEDHPWANREC 180

Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240
           +   +L  E +L+L +GHC RDQ +  C     F    D     F  +SLET+R+MV++G
Sbjct: 181 VPMSDLAGEKLLMLEDGHCLRDQAMGFC-----FEAGADEDTH-FRATSLETLRNMVAAG 234

Query: 241 IGVTVLPRASIPDVDTRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAV 296
            G+T+LP  ++P    RDG+V YVP + P P R V + +R     ++  + + +A+
Sbjct: 235 SGITLLPALAVPQERKRDGVV-YVPCIKPEPRRTVGLVYRPGSPLRSRYEHLAEAI 289