Pairwise Alignments

Query, 881 a.a., DNA gyrase subunit A from Herbaspirillum seropedicae SmR1

Subject, 931 a.a., DNA gyrase subunit A from Sinorhizobium meliloti 1021

 Score =  796 bits (2055), Expect = 0.0
 Identities = 434/922 (47%), Positives = 591/922 (64%), Gaps = 77/922 (8%)

Query: 10  PISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWNRPFVKCARV 69
           PIS+ EEM++SYLDYAMSVIV RALPDVRDGLKPVHRR+LY M E+   WN+ +VKCARV
Sbjct: 18  PISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARV 77

Query: 70  VGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAMRYTECRLDK 129
            G+VMGKYHPHG+A+IYD L RMAQD+SLR  L+DGQGNFGS+DGD  AA RYTECRL K
Sbjct: 78  TGDVMGKYHPHGNAAIYDALARMAQDWSLRLPLIDGQGNFGSVDGDPPAAERYTECRLQK 137

Query: 130 ISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMATNIPPHNITE 189
            ++ LL D++K+TVDF  NYDG   EP V+P + PNLLVNG+ GIAVGMATNIPPHN+ E
Sbjct: 138 AAHSLLDDLDKDTVDFRDNYDGTLHEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLVE 197

Query: 190 VINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRVVMRAKTHFE 249
           VI+G + L+ N    + EL++++P PDFPTG +I G SG+R  Y TGRG V+MR + H E
Sbjct: 198 VIDGCIALIDNPAIELPELMQIIPGPDFPTGALILGRSGIRQAYETGRGSVIMRGRAHIE 257

Query: 250 EYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSGMRVVIELKR 309
              R  R  II+ E+PYQVNK  ++E++AELVR+K++EGISDLRDESD+ G RVVIELKR
Sbjct: 258 PM-RGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGYRVVIELKR 316

Query: 310 GEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRREVVTRRTVFE 369
               EV+LN LY+ T LQ +FG NMVAL  G+P  + L  +L  F+S R +VV+RRT + 
Sbjct: 317 DANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAFVSFREDVVSRRTKYL 376

Query: 370 LRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMVREMLARAGE 429
           LRKARER HVL GLA+A+ANID+ I +IR AP P  A+ +LM R W +  V  ++    +
Sbjct: 377 LRKARERAHVLVGLAIAVANIDEVIKLIRQAPDPQTAREQLMERRWPAHDVDALIRLIDD 436

Query: 430 ANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDKIVNEYKDVM 489
                         P H  I  D  Y LS+EQA+ IL +RLQRLT L +D+I +E   + 
Sbjct: 437 --------------PRH-RINDDATYNLSEEQARAILDLRLQRLTALGRDEIGDELNKIG 481

Query: 490 AQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLATEDLITPQD 549
            +I D LDIL+   R+  I+ +EL A +++FG      RR+ I     D+  EDLI  +D
Sbjct: 482 EEIKDYLDILSSRLRIMQIVKNELTAVRDEFG----TPRRTEIAEGGPDMDDEDLIAQED 537

Query: 550 MVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDYILCFSNRGR 609
           MVVT+SH GY+K  P++ YRAQ+RGG+G+  MAT+D+D++ +LF+ANTH  +L FS+RG 
Sbjct: 538 MVVTVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGI 597

Query: 610 LYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRYVFMATSLGT 669
           +Y  KVW +P G+  SRGK ++NM PL+ GE+IT I+P+     ++ ++  V  +T+ GT
Sbjct: 598 VYKEKVWRLPIGTPQSRGKALINMLPLEPGERITTIMPLPEDETTW-ENLDVMFSTTRGT 656

Query: 670 VKKTPLSDFSNPRKAGIIAVDL-DEGDFLIGAALTDGQHDVMLFSDGGKAVRFDENDVRP 728
           V++  LSDF    + G IA+ L +EGD ++         DV+L +  G+ +RF   DVR 
Sbjct: 657 VRRNKLSDFVQVNRNGKIAMKLEEEGDEILSVDTCTEFDDVVLTTALGQCIRFPVADVRV 716

Query: 729 M-GRTARGVRGMNLEETQQVIAL--------------------------LVAENE----- 756
             GR + GVRG++L +  ++I++                          L  E E     
Sbjct: 717 FAGRNSIGVRGISLGDGDRIISMAIVAHVEAEPWERAAYLKRSAAERRALTGEEEEIVLV 776

Query: 757 ---------------------QQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSE- 794
                                +Q +LT +  GFGKR+   ++   GRG KG+ A  TS+ 
Sbjct: 777 GEEVTNGGELTNERYEELKAREQFILTVSMKGFGKRSSSYDFRTSGRGGKGIRATDTSKT 836

Query: 795 -RNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLIAVEDGTKLSGLQ 853
              G++VAA  ++  D+IML++ GG LIR  V  IR   RAT+GVT+ +     K+  ++
Sbjct: 837 AEIGELVAAFPIEHNDQIMLVSDGGQLIRVPVEGIRLASRATKGVTIFSTAKDEKVVSVE 896

Query: 854 RVVESDVEDAVEGDNAEGAGSE 875
           R+ E D ++ +E   AEG  +E
Sbjct: 897 RITEPDGDEEIEAVGAEGVMAE 918