Pairwise Alignments

Query, 881 a.a., DNA gyrase subunit A from Herbaspirillum seropedicae SmR1

Subject, 943 a.a., DNA gyrase, subunit A (NCBI) from Rhodospirillum rubrum S1H

 Score =  813 bits (2099), Expect = 0.0
 Identities = 453/941 (48%), Positives = 602/941 (63%), Gaps = 91/941 (9%)

Query: 10  PISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWNRPFVKCARV 69
           P+S+E+EM++SYLDYAMSVIV RALPDVRDGLKPVHRR+LY+M E    +N+P+ K AR+
Sbjct: 15  PVSIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMKESGYEFNKPYRKSARI 74

Query: 70  VGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAMRYTECRLDK 129
           VG+VMGKYHPHGD SIYD +VRM Q+F++R  L+DGQGNFGS+DGD AAAMRYTE R+ K
Sbjct: 75  VGDVMGKYHPHGDQSIYDAMVRMVQNFAMRLPLIDGQGNFGSMDGDRAAAMRYTEARMAK 134

Query: 130 ISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMATNIPPHNITE 189
            ++ LL DI+KETVDF PNYD   +EP VLP R PNLLVNG+ GIAVGMATNIPPHN+ E
Sbjct: 135 AAHSLLDDIDKETVDFQPNYDETTREPIVLPARFPNLLVNGAGGIAVGMATNIPPHNLGE 194

Query: 190 VINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRVVMRAKTHFE 249
           VI+    ++ N   T +EL+ELVP PDFPTGG I G SGVR  + TGRG V+MR +THFE
Sbjct: 195 VIDACCAMIDNPAVTAEELLELVPGPDFPTGGTILGRSGVRAAHLTGRGSVIMRGRTHFE 254

Query: 250 EYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSGMRVVIELKR 309
           +    GR AIIV E+PYQVNK +++E+IAELVR+KKLEGISD+RDESD+ G+RVVIE+KR
Sbjct: 255 DIS-GGRQAIIVTEVPYQVNKASMVEKIAELVREKKLEGISDIRDESDRRGVRVVIEVKR 313

Query: 310 GEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRREVVTRRTVFE 369
             + EVVLN L++ T LQ +FG+NM+AL  G+P LL L+ ++E F++ R EV+ RRT+FE
Sbjct: 314 DAMAEVVLNQLFRYTPLQTSFGVNMLALNGGKPELLALRPIIEAFITFREEVIRRRTIFE 373

Query: 370 LRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMVREMLARAGE 429
           L KARER H L GLA+A+AN+D  I +IR AP P  A+  LM+R W +  V  ++    E
Sbjct: 374 LGKARERAHTLVGLAIAVANLDPVIKLIREAPDPQAAREGLMARDWPAMDVEPLIKLIDE 433

Query: 430 ANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDKIVNEYKDVM 489
                I                DG+Y+LS+ QA+ IL +RL RLTGLE+DK+  E  ++ 
Sbjct: 434 PGRMVI----------------DGVYRLSEIQARAILDLRLHRLTGLERDKLHGELIEIG 477

Query: 490 AQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLATEDLITPQD 549
            QI + L IL   AR+  I+  EL   K  +       RR+T+E N  +   EDLI  ++
Sbjct: 478 QQIEEYLHILRSRARLFEIMRAELVEMKEAYA----TPRRTTLEENEFEHDIEDLIQREE 533

Query: 550 MVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDYILCFSNRGR 609
           MVVT+++TGY+K  P++ YRAQ+RGGRG+  M+ +D+D++  +F+ NTH  +L FS+ G 
Sbjct: 534 MVVTVTNTGYIKRVPLTTYRAQRRGGRGRAGMSMRDEDFVTTIFVVNTHAPLLFFSSDGM 593

Query: 610 LYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRYVFMATSLGT 669
           +Y +KV+ +P G+  +RGK +VN+ PL +GE+IT ++P+     ++ D   V  AT  G 
Sbjct: 594 VYKMKVYRLPLGTPQARGKAMVNIMPLNEGERITTVMPLPEDEGAW-DQLDVMFATETGN 652

Query: 670 VKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVRFDENDVRPM 729
           V++  LSDF+N    G IA+ LDEGD LIG A    + DV+L ++ GKA+RF   DVR  
Sbjct: 653 VRRNRLSDFTNVMSNGKIAMKLDEGDHLIGVATCTDEQDVLLTTNLGKAIRFAVGDVRVF 712

Query: 730 -GRTARGVRGMNLEETQQVIALLV---------------------------AENEQQS-- 759
            GRT+ GVRG+ L E  +V  L +                            E E  S  
Sbjct: 713 AGRTSTGVRGIRLAEDDRVNRLSILGHVEASAETRAAYLKQASALRRASGETEGEDDSTL 772

Query: 760 ---------------------VLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSERNGK 798
                                +LT T  GFGKRT   EY   GRG +G+  I+ SERNG 
Sbjct: 773 DAEPGVLSAEEFEDLRQREEFLLTVTSRGFGKRTSAYEYRVTGRGGQGIANIEMSERNGT 832

Query: 799 VVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLIAV-EDGTKLSGLQRVV- 856
           VVAA  + + D++M+IT GG LIR  V+++R  GR TQGVTL  + +DG  +  + R+  
Sbjct: 833 VVAAFPIANEDQVMMITDGGQLIRMPVNDVRIAGRKTQGVTLFRLSDDGEHVVSVARLPE 892

Query: 857 ----------------ESDVEDAVEGDNAEGAGSEAPAAGE 881
                           ES  EDA  G +  G  S  P AG+
Sbjct: 893 MNGNGDDGEGDDETPDESLAEDANGGRDESGEASGLPPAGQ 933