Pairwise Alignments

Query, 881 a.a., DNA gyrase subunit A from Herbaspirillum seropedicae SmR1

Subject, 873 a.a., DNA gyrase subunit A-like protein from Marinobacter adhaerens HP15

 Score = 1044 bits (2699), Expect = 0.0
 Identities = 519/888 (58%), Positives = 687/888 (77%), Gaps = 23/888 (2%)

Query: 1   MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN 60
           M + AKE +P+++E+E+++SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM E+NN WN
Sbjct: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60

Query: 61  RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM 120
           + + K ARVVG+V+GKYHPHGD+++YDT+VRMAQ FSLRY LVDGQGNFGSIDGD AAAM
Sbjct: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120

Query: 121 RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT 180
           RYTE R++KI++ LLAD++KETVDFV NYDG E+ P VLPTR+PNLLVNGSSGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDFVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV 240
           NIPPHN+TEV+NG L L+ N   TIDEL+E +P PDFPT GII G +G+ + YRTGRGR+
Sbjct: 181 NIPPHNLTEVVNGCLALIDNPDLTIDELMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRI 240

Query: 241 VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG 300
            +RA+   E   +  R AII+ ELPYQ+NK  L+E+IAELV++K+LEGIS+LRDES+K G
Sbjct: 241 YIRARHEIEHDNKTNRDAIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300

Query: 301 MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE 360
           +RVVIEL+RGE P+VV+NNL+ QTQL+  FG+NMV L++G+P+ LNLKQLL+ F+ HRRE
Sbjct: 301 IRVVIELRRGENPDVVVNNLFAQTQLETVFGINMVGLINGEPKTLNLKQLLDAFVRHRRE 360

Query: 361 VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV 420
           VVTRRT++ELRKARERGH+LEGL VALANID+ I +I+A+P+   AK +L+++ W    V
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKASPSAAEAKEKLIAKGWSPGDV 420

Query: 421 REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK 480
             ML RAG+      +A RP+ LP  YG++ +GLY LS EQAQ IL +RL RLTGLE +K
Sbjct: 421 MAMLERAGQ------DACRPDDLPEIYGLR-EGLYHLSPEQAQAILDLRLHRLTGLETEK 473

Query: 481 IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA 540
           + NEYK+++ +IADLLDIL  P R+  +I +EL A   +FG    DERR+ I  +  DL 
Sbjct: 474 LQNEYKEILDKIADLLDILGDPERLLQVIREELEAIVTEFG----DERRTEITSSRRDLT 529

Query: 541 TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY 600
             DLI  +D+VVT+SH+GY K+Q V +Y+AQ+RGGRGK A + KD+D++++L +AN+HD 
Sbjct: 530 IADLIDEEDLVVTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDT 589

Query: 601 ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY 660
           ILCFSNRG++YWL+V+E+P+ SR SRG+P+VN+ PL +GE+IT  LPV    R +P+D++
Sbjct: 590 ILCFSNRGKVYWLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPV----RDYPEDQF 645

Query: 661 VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR 720
           V MATS G VKKTPL +FS PR +G+IA+ LDEGD LIGAA+T G  +VMLFS  GKAVR
Sbjct: 646 VLMATSAGVVKKTPLPNFSRPRSSGLIALSLDEGDTLIGAAITKGDAEVMLFSTAGKAVR 705

Query: 721 FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH 780
           F+E  VRPM RTARGVRG+ + +   V++L++ + +   +LTA+ENG+GKRT I E+  +
Sbjct: 706 FNEEAVRPMSRTARGVRGIKMPQGHHVVSLIIPQ-DGGVILTASENGYGKRTAIDEFPTY 764

Query: 781 GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL 840
            RG++G+IA+Q SERNG +V A  +   DE+MLI+  G L+RTR  E+  + R TQGV L
Sbjct: 765 SRGSQGVIAMQCSERNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVLSRNTQGVRL 824

Query: 841 IAV-EDGTKLSGLQRVVESDVED------AVEGDNAEGAGSEAPAAGE 881
           I + ++  +L G++R+ E+D E+       +  D +   G E  +AG+
Sbjct: 825 IKLSQEDERLVGVERIAETDDEELDSEGNPIVADESPEEGQEGESAGD 872