Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 296 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  145 bits (366), Expect = 1e-39
 Identities = 109/295 (36%), Positives = 148/295 (50%), Gaps = 13/295 (4%)

Query: 1   MELRHLRYFLTVAEELHFARAAEVLGIAPPTLSVQIQQLERQLQAQLFVRGKRAIALTSA 60
           MELR LRYF+ +AEELHF RAA  + ++ P LS QI+ LE +L A+LF R  R + LT  
Sbjct: 1   MELRQLRYFVALAEELHFGRAARRVHVSQPPLSQQIRALEEELGARLFDRTSRRVLLTPE 60

Query: 61  GEDFVVQARAVLARFEQAIDAGRRAGRGEMGRVEVGYVGSAVFGGILQQQLSAFRQRWPQ 120
           GE F+   R VL   E+A+D  R   +GE GR+ VG+VGSAV        ++AFR+R P 
Sbjct: 61  GEAFLEDVRGVLRGLEEAVDRVRGVAQGERGRLRVGFVGSAV-STRFPAGVAAFRERHPA 119

Query: 121 VLVHAREWPMLQLGAALEEGKLDIAFVRLPVPLGQT---LQSHVLLRDRFCLALPTDHAL 177
           V +  RE   L    A+ EG+LD+   R    LG+T   L +   L D + LALP  H L
Sbjct: 120 VRLELRESGTLVQRRAIAEGRLDVGLFR---NLGETPDDLTTEPFLHDSYILALPERHPL 176

Query: 178 ASKPGA----IRSRALAGEDF-ILPEQELGSREVWRRGGFAPRRVSRPGGLLAVLAEVAV 232
           A +       +R   L      + P       E  R  GF+PR       +    A VA 
Sbjct: 177 AGRDSVNLADLRDVPLVMYPRPVFPAAYDAIIEACRSVGFSPRIGQEAVSIGTQKALVAA 236

Query: 233 GAGVAVVPGVLTTVVNLPNVSYRALAGAAVVSEVAAVYRRFERAPAVRNMIAALR 287
           G GVA+VPG  T       V+YR + G      +   +R+      +R  + A+R
Sbjct: 237 GTGVAIVPGA-TRREPREGVAYRTIIGPLPDIRLDLAWRKGRDDALLRAFLDAVR 290