Pairwise Alignments

Query, 156 a.a., transcription antitermination protein NusB from Herbaspirillum seropedicae SmR1

Subject, 161 a.a., transcription antitermination factor NusB from Pseudomonas stutzeri RCH2

 Score =  127 bits (319), Expect = 8e-35
 Identities = 62/134 (46%), Positives = 81/134 (60%)

Query: 17  RHRAREFALQGLYQWLLNHEDAGAIEAHIREAHGFDKADAEHFDTLLTGAIRDAEKLRAG 76
           R  AR  A+Q LYQW +  +    IEA  R  + F   D  +F  LLTG  R   ++   
Sbjct: 23  RRVARSLAMQALYQWHMAGQSLNEIEAQFRVDNDFSGVDGSYFHELLTGVARSKSEVDGA 82

Query: 77  LAPLIDRPIKELSPVEHAALLIGAYELQNHIEIPYKVVINEAVELTKSFGGIDGHKYVNG 136
           +AP +DRP+ EL PVE A L +  YEL   I++PY+VVINE +EL K +G  DGHK+VNG
Sbjct: 83  IAPNLDRPLDELDPVELAILRLSTYELMQRIDVPYRVVINEGIELAKVYGATDGHKFVNG 142

Query: 137 VLDRFAAQTRATEV 150
           VLD+ A   R+ EV
Sbjct: 143 VLDKLAPTLRSAEV 156