Pairwise Alignments

Query, 156 a.a., transcription antitermination protein NusB from Herbaspirillum seropedicae SmR1

Subject, 160 a.a., transcription antitermination protein NusB from Sinorhizobium meliloti 1021

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 10/148 (6%)

Query: 12  KNRTPRHRAREFALQGLYQWLLNHEDAGAIEAHIRE--------AHGFDKADAEHFDTLL 63
           K    R  AR  A+Q LYQ  +       I A   E           + +ADA  F +++
Sbjct: 11  KQVNQRGAARLAAVQALYQMDVGGTGVLEIVAEYEEHRLGKELDGDTYLRADASWFRSIV 70

Query: 64  TGAIRDAEKLRA--GLAPLIDRPIKELSPVEHAALLIGAYELQNHIEIPYKVVINEAVEL 121
            G +RD  KL    G A   D  +  L     A L  G +E+    ++P  V++ E VE+
Sbjct: 71  AGVVRDQRKLDPLIGSALQDDWALSRLDSTVRAILRAGTFEILERKDVPVPVIVTEYVEI 130

Query: 122 TKSFGGIDGHKYVNGVLDRFAAQTRATE 149
            K+F   +  K VN VLDR A Q R  +
Sbjct: 131 AKAFFQDEEPKLVNAVLDRIAKQVRGDQ 158