Pairwise Alignments

Query, 279 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 261 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 25/91 (27%), Positives = 39/91 (42%)

Query: 172 GSADLRLLNVSQAALRLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVG 231
           GS D+RL  +        + GSG+I + G       N+ GSG I  + LE       + G
Sbjct: 160 GSGDVRLKQIDSKTCSASISGSGNITLDGMTGAAKYNISGSGNIKAADLEATDVYAGISG 219

Query: 232 SGEVKLGPSEEADLSLQGSGDITLLTRPTTI 262
           SG +    + +    + GSG++     P  I
Sbjct: 220 SGNISCFVNGKLGGHVSGSGNVAYKGNPQAI 250



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 188 LELCGSGDIRVAGRAQ---HVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGP--SEE 242
           L L GSG I  A        +   + GSG +  S  +     + + GSG+V+L    S+ 
Sbjct: 114 LTLNGSGGILFANGIHTEGDLKVTINGSGNLGGSTFDTGHLAISIHGSGDVRLKQIDSKT 173

Query: 243 ADLSLQGSGDITLLTRPTTIRTHVLGSGDIR 273
              S+ GSG+ITL       + ++ GSG+I+
Sbjct: 174 CSASISGSGNITLDGMTGAAKYNISGSGNIK 204