Pairwise Alignments

Query, 279 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 263 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.8 bits (151), Expect = 8e-15
 Identities = 34/91 (37%), Positives = 45/91 (49%)

Query: 172 GSADLRLLNVSQAALRLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVG 231
           GS D+ L NV    +  E+ GSGDI + G AQ  T  V GSG+I    L        V G
Sbjct: 161 GSGDIDLKNVKATTVMSEVNGSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAG 220

Query: 232 SGEVKLGPSEEADLSLQGSGDITLLTRPTTI 262
           SG++    S + D  + GSGDI     P+ +
Sbjct: 221 SGDIVCYASRQLDARVSGSGDIEYKGSPSVV 251



 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 172 GSADLRLLNVSQAALRLELCGSGDIRVAG--RAQHVTANVMGSGEIDLSLLEHLRATVKV 229
           G   L+++  S +  ++ + GS D+ + G  +   +  N+ GSG+I+   L++      V
Sbjct: 100 GERRLKVIASSPSLNQVNIKGSADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALV 159

Query: 230 VGSGEVKL---------------------GPSEEADLSLQGSGDITL-LTRPTTIRTHVL 267
            GSG++ L                     G +++A L++ GSGDI+      T +   V 
Sbjct: 160 KGSGDIDLKNVKATTVMSEVNGSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVA 219

Query: 268 GSGDI 272
           GSGDI
Sbjct: 220 GSGDI 224