Pairwise Alignments

Query, 319 a.a., 3-phosphoglycerate dehydrogenase from Herbaspirillum seropedicae SmR1

Subject, 318 a.a., glycerate dehydrogenase (NADH-dependent) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  128 bits (321), Expect = 2e-34
 Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 11/285 (3%)

Query: 36  EEVIAASAGCQGLLVQYAPVNAKVFAARPEIRIASRYGAGFDTINTADAAAHGVWVANSP 95
           EEV+  +AG + +L     +NA    A PE++       G++ ++TA A   G+ V N P
Sbjct: 36  EEVLERAAGAEVILTNKVIINADHMTALPELKYIGVLATGYNVVDTAVAKERGIIVTNIP 95

Query: 96  DYGVGEVATHALAMALDLIRNITVYDRAVKAGEW-------HYTTAGIIPRASDLTIGII 148
            Y    VA    A  L++ + +  +   V  G W        + T  I  R  D  IG++
Sbjct: 96  AYSTASVAQMVFAHILNICQQVQHHSEEVHKGRWTNNKDFCFWDTPLIELR--DKKIGLV 153

Query: 149 GLGRIGKRMAHISRNLFKRVIAYDPYIIDGDFPAYVERVGREELFRQAHVVSLHTPLNDE 208
           GLG  G   A ++     +V A          P  ++++  ++LF +  ++SLH PL  E
Sbjct: 154 GLGNTGYTTARVAIGFGMQVYALTSKS-HFQLPPEIKKMDLDQLFSECDIISLHCPLTPE 212

Query: 209 TRNMIDASLLDLLQAQSYLVNSARGGLVKIDDLLAALENGKLKGAALDVLPVEPPQTASA 268
           T  +++A  L L++  + L+N+ RG LV   DL  AL +GK+  A +DVL  EPP+  + 
Sbjct: 213 THELVNARRLALMKPNAILINTGRGPLVNEQDLADALNSGKIYAAGVDVLSSEPPRADNP 272

Query: 269 IVQHPRVLLSPHAAFFSDVAARELRRKAAKNLIDWDRTGRPSYVV 313
           ++      ++PH A+ S  A   L   A  NL  +  +G P  VV
Sbjct: 273 LLTAKNCYITPHIAWASTEARERLMNIAISNLQAY-ISGTPENVV 316