Pairwise Alignments

Query, 256 a.a., GntR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 255 a.a., GntR domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  112 bits (279), Expect = 1e-29
 Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 9/227 (3%)

Query: 1   MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60
           MP + I+ ++L   +  Q+ +L++ G    G RLPSER+L+ +LGVSRPSLREAL  L+ 
Sbjct: 1   MPFQRIQSEKLSHSVIRQIEQLVLRGILRPGERLPSERELSEKLGVSRPSLREALAELQT 60

Query: 61  EGHIEVRMGSGIYVCPPVQ---RERRIDL--SSEEGPLELIRAREMIEGEVAYAAAQHGS 115
            G +E R G+G++V   +     +  I L    +E   + +  R  +EG  A  AA+ GS
Sbjct: 61  RGLLETRAGAGVFVADVLGSAFSDALIQLFAKHDEAVFDYLAFRRDLEGLAADRAARLGS 120

Query: 116 KQQIAAVEEAYALMISNAQAGIDPLEADRL---FHIRLAEATGNSVLVGLVTQLFDARLG 172
           +  +  V+  +  M   A +  +P E   L   FH+ + EA+ N +++ ++  +FD    
Sbjct: 121 ETDLKVVDTIFRKM-EAAHSKRNPDEESMLDAEFHLAIVEASHNVIMLHMMRSMFDLLRE 179

Query: 173 PLFKRLHSHFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMD 219
            +F      F       + +++H  +  AL+ R+P+ AR A++ H+D
Sbjct: 180 GVFYNRKIMFKQRATRDQLLEQHRAINAALQARDPQAARGAVQHHLD 226