Pairwise Alignments

Query, 755 a.a., catecholate siderophore receptor Fiu from Herbaspirillum seropedicae SmR1

Subject, 730 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  300 bits (767), Expect = 2e-85
 Identities = 219/782 (28%), Positives = 367/782 (46%), Gaps = 79/782 (10%)

Query: 1   MSFIKSRKHASPAHAARLPSLAVA-SALLLPVMGAH-AQTSGSGLPPTRVDGARESPYKS 58
           M F K R       A  L SL +  +A  +P M A  AQ     +    V+G     Y +
Sbjct: 1   MKFAKRRNGRVTLGAHVLGSLTIGMAASAIPAMAAEQAQVVDKKVEHIEVNGEYLG-YNT 59

Query: 59  EYSASPKYTQPLVDTPQTLQILRRPLMAQQAATSLSDVLRNTPGVGAFFLGENGSTSTGD 118
               S K+T+ L++T +T+ ++ + L+    A S +D LR TPG+     GE G+   GD
Sbjct: 60  RKVQSGKFTEDLLNTAKTVTVINQDLIKDMGAQSFTDALRATPGI-TLGTGEGGNPY-GD 117

Query: 119 TIYMRGFDATGVIFVDNVRDLGAISRDVFNIEQVEVLKGQAGTDNGRGSPTGSINLVTKQ 178
             ++RG+DA    F++ +R++G+ SR+ FNIEQ+EVLKG +   NGRG+  GSIN+VTK+
Sbjct: 118 RPFIRGYDAQSSTFINGMRNVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKK 177

Query: 179 PELVDAVTVSATYGSWIQKRATLDWNRILDADRGLALRLNLMKQHSGVPGRHVVHNARDG 238
            +  D +      G+   KRA +D N ++  +   A+R+N+M   +  PGR  V   R G
Sbjct: 178 AQAEDFINADVAVGTDALKRANVDINHVITDE--AAVRVNMMAHDADTPGRDEVTGNRWG 235

Query: 239 FAPSLAFGLNTPTRIFFNYLHIQQDNVPDGGV---STIGLPGYSTPDPNRPYISNAPKVS 295
            APS+ FGL TPT++   Y H +  ++PD G+      G P    PD             
Sbjct: 236 VAPSVTFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGKPADVDPD------------- 282

Query: 296 TSNFYGHVN-DYNRVNTDMTTLRVEHDFSPDLKLQNTTRYARTDQDYRLSSFVAIGVKTD 354
             NFYG ++ D+     D  ++ + HDF+ D++  +T+ Y+R    Y             
Sbjct: 283 --NFYGLLSRDFRDTMDDTASVLISHDFNNDMQFTSTSIYSRNSNYY------------- 327

Query: 355 RSSVSLFTPSPEDRSTWEVSRNIITRRDQS----NEILSNQTHLTASFQSGALQHTLVGG 410
                    +P+D +   V++  + R  +S     + L+ Q  L+         +    G
Sbjct: 328 ------IVTNPDD-TAGNVAKGYVWRNTKSRHSVTKTLATQLQLSGEATLAGFTNRFAVG 380

Query: 411 LELTRERQHALSF---TGPSRRPRAN-----------LYQPNPEFDDSGTLISVNGRNKG 456
            EL+ E    LS+   TG  R    N           L  PNP     G +         
Sbjct: 381 TELSNEHTSNLSYTVDTGNGRNGGCNEAMLANYNCTLLDNPNPHDPWIGKIALGTDATVT 440

Query: 457 QTDTVSLYALDTLKFNERWSLSLGLREDFYRTSFDDTKPNAGGPLHKSGGLFNAKVAVVF 516
           +TDT S+Y  +T++  E W ++ G+R D Y TS  ++    G         FN +++V++
Sbjct: 441 ETDTRSIYGFNTIELTEAWMVNAGIRWDDYSTSAKNSTSQFG----NDADFFNYQLSVLY 496

Query: 517 KPTSYSSLYALYASAQQPPGGANFNLSASRSNASHTDYAPQKTDTGEIGTKWELLDRKLI 576
           KP    S+YA + ++  PPG +N +  A R  +++ D  P+ T++ E+GTKW+L + +L 
Sbjct: 497 KPAENGSIYAAWGTSSNPPGTSNGD-GADRLGSTNADLEPEDTESYELGTKWDLWEGRLS 555

Query: 577 ATAALYRTEVNNEVELDSLTNTYFQ--TGKKITQGLELGVTGDLSPTVSLTAGYSHMQSQ 634
              ++++ E NN     S      Q   G++  +G E+G +GD +       GY+++ + 
Sbjct: 556 LNGSVFQIEKNNARVATSGDRNAPQENVGEQKVKGFEIGFSGDFTEDWHGFGGYTYLDAT 615

Query: 635 VSRGALVSATGENFLAYAPRRSFTSWVSWRLPQGFTLGGGLRYSGGLLRGRDTNAIGTPK 694
           +      +A   N      + S + + ++ + +  T+G G  Y   +  G   N +  P 
Sbjct: 616 LESNGYNAALNGNRFPNTAKNSLSLFTTYDITEQLTVGTGAYYMDKVY-GNTANTLSIP- 673

Query: 695 DTGAYWVADVMASYVIHQHAEIQLNVNNLFNNSYVRSINKSGYRYL-PGDARNISLTGNF 753
              +YW  D+ +SY I +   ++LNV NL +  Y      + +  + PG  R + L+ + 
Sbjct: 674 ---SYWRFDLTSSYKISEFMTLRLNVQNLTDERYYDKAYTAHFANMAPG--RLVMLSADM 728

Query: 754 HF 755
           HF
Sbjct: 729 HF 730