Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 10/325 (3%)

Query: 8   ETAYMAVRVARLYYFQNMTTAAIADEIGTSRATVSRLLSFALERGLVEIRVHDPQQVSGS 67
           E+  +   +A  YY    T   I+ +   SRA V RLL  A + G+VEI V      S  
Sbjct: 10  ESTDLLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAK 69

Query: 68  LEAAIANHYRLHSIQVVPVAAAATDKETLQRVTCHAAAYVNSLVTPGTIIGLAWGTTVAQ 127
           +E  +   + +    +        D+   Q+V    + Y+ S +  G ++ +  G  V+ 
Sbjct: 70  IEQRLIERFGVRRALIA--LDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQGRNVSA 127

Query: 128 IADQLLPRHVHDVDVV-ALNGSGSGASFINSFSESIVSRFAQNYGARAHHLPVPAFFDYP 186
           +A  +      D   V ++ G        N+  + I  + A+ YG  +  L  PA+ + P
Sbjct: 128 VAHHVGVITPRDCKFVCSIGGIHPRGGMFNA--DHICRQLAKKYGGSSETLYAPAYAENP 185

Query: 187 ETRTALWREKSIKAIRDLQERASILLFSIGAEATGSYIHTAGYLGEEE-RQILRDEGLVG 245
           E +    +  ++K   DL  +A I L  IG  +  SY+   G+   EE  Q   ++G+VG
Sbjct: 186 EQKRVFMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLNQGVVG 245

Query: 246 DIA-TVFFRADGSWRDVAFNARNSGPDMDCFTRAAHALCVVSGAGKLPGLKAALRGGFIN 304
           D A   FF   G   +   N R  G  +D F   A  + + +   K   L  ALR G I+
Sbjct: 246 DFAGHDFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAID 305

Query: 305 ELIIDEPSARLLV---EQIRNGAAA 326
            +     +A  ++   EQ++   +A
Sbjct: 306 VIATSVSNALTVLNLDEQMQTALSA 330